RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 CHD3Q12873 2000 aaKnown RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 IGKV1D-8A0A087WSZ0 117 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 TMEM238LA0A1B0GVL6 79 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 MBD3L4A6NDZ8 208 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 MBD3L3A6NE82 208 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 MBD3L5A6NJ08 208 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 ANKRD30BLA7E2S9 258 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF732B4DXR9 585 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 M0R233 179 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 GEMIN2O14893 280 aaKnown RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 TOXO94900 526 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 SIX6O95475 246 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 CGAP01215 116 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 IGKV3-15P01624 115 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 CTSDP07339 412 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 FCGR3AP08637 254 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 HOXD4P09016 255 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 LYL1P12980 280 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF35P13682 527 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 RAC2P15153 192 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 CCNOP22674 350 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 PTGER4P35408 488 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 HTR2BP41595 481 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 GNG3P63215 75 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 SUPT4H1P63272 117 aaKnown RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 PMP22Q01453 160 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 IL24Q13007 206 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 IL15RAQ13261 267 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 IL13RA2Q14627 380 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 HLXQ14774 488 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 TBC1D28Q2M2D7 210 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 EIF2S3LQ2VIR3 472 aaKnown RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 C3orf36Q3SXR2 165 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 PLEKHN1Q494U1 663 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 HIKESHIQ53FT3 197 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 CLLU1Q5K131 121 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 C11orf87Q6NUJ2 197 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 CLEC18BQ6UXF7 455 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 C3P1Q6ZMU1 363 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 C17orf107Q6ZR85 190 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC25A26Q70HW3 274 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 TMUB2Q71RG4 321 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF573Q86YE8 665 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 C17orf78Q8N4C9 275 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 WDR31Q8NA23 367 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC30A7Q8NEW0 376 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 MBD3L2Q8NHZ7 208 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 COQ8AQ8NI60 647 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 GALNT14Q96FL9 552 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 HIST1H2AAQ96QV6 131 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 TAAR6Q96RI8 345 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 DIRC2Q96SL1 478 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 DPCDQ9BVM2 203 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 PAPOLGQ9BWT3 736 aaKnown RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 OR51I2Q9H344 312 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 RIMS4Q9H426 269 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 C12orf49Q9H741 205 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 SPACA1Q9HBV2 294 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 NECAP2Q9NVZ3 263 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 MED9Q9NWA0 146 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 EHFQ9NZC4 300 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 MTCH1Q9NZJ7 389 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 COMMD9Q9P000 198 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 DKK4Q9UBT3 224 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF230Q9UIE0 474 aaPredicted RBP5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 GPR160Q9UJ42 338 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 MAB21L2Q9Y586 359 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 CELSR3Q9NYQ7 3312 aa5.14□□□□□ -1.59
VIPAS39-204ENST00000553576 A0A1B0GWJ7 208 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 IQCF6A8MYZ5 107 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 TRAPPC2LH3BP13 241 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 SDCBPO00560 298 aaPredicted RBP5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 NOS1APO75052 506 aaPredicted RBP5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 B3GALNT1O75752 331 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 WISP2O76076 250 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 OR2F2O95006 317 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 NAPSAO96009 420 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 IGLV1-44P01699 117 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 CTXN2P0C2S0 81 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 OR5H8P0DN80 308 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 MED14OSP0DP75 135 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 CCL2P13500 99 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 SELEP16581 610 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 AKR1C4P17516 323 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 BCL3P20749 454 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 GLRA1P23415 457 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 PSMB6P28072 239 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 TIMP3P35625 211 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 HAAOP46952 286 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 NPBWR2P48146 333 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 NPY4RP50391 375 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 GPM6AP51674 278 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 UCP2P55851 309 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 UBE2NP61088 152 aaKnown RBP5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ERVK11-1P61568 191 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 OR2F1Q13607 317 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 EXOSC2Q13868 293 aaKnown RBP5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 P2RY6Q15077 328 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 PIGYQ3MUY2 71 aa5.13□□□□□ -1.59
VIPAS39-204ENST00000553576 ACSF3Q4G176 576 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms