RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	IGHV3OR15-7	A0A075B7D8	119 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A1B0GVI7	797 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570		A0A1W2PP11	408 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	FAM230A	A0A1W2PPH8	454 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	ANXA2P2	A6NMY6	339 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	PPIAL4D	F5H284	164 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570		H3BSA7	217 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	MLNR	O43193	412 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	MPZL2	O60487	215 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	GMDS	O60547	372 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	LMX1B	O60663	402 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	ZNF254	O75437	659 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	MTRF1	O75570	445 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	HTR1A	P08908	422 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	ACAA1	P09110	424 aa	Predicted RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	PPIAL4F	P0DN26	164 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	IGHV4-31	P0DP07	118 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	ANOS1	P23352	680 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	CFL1	P23528	166 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	GIF	P27352	417 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	SRP14	P37108	136 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	DDOST	P39656	456 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	OPRL1	P41146	370 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	SNRPG	P62308	76 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	LCN2	P80188	198 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	FAM3A	P98173	230 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	SLC34A1	Q06495	639 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	RIPPLY1	Q0D2K3	151 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	PRDX4	Q13162	271 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	MPPED2	Q15777	294 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	PCK2	Q16822	640 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	C9orf152	Q5JTZ5	239 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	FAM201A	Q5SY85	155 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	MEDAG	Q5VYS4	303 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	TTC23	Q5W5X9	447 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	DHRS7B	Q6IAN0	325 aa	Predicted RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	FAM166A	Q6J272	317 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	TEX38	Q6PEX7	206 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	ZNF826P	Q6ZT77	177 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	SSX6	Q7RTT6	188 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	C1orf87	Q8N0U7	546 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	FTMT	Q8N4E7	242 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	RFLNB	Q8N5W9	214 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	GCSAM	Q8N6F7	178 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR5T2	Q8NGG2	359 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR8B12	Q8NGG6	310 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	CLDND2	Q8NHS1	167 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	CNIH3	Q8TBE1	160 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	NPRL2	Q8WTW4	380 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	MRPL48	Q96GC5	212 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR8B4	Q96RC9	309 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	MICU1	Q9BPX6	476 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	SLC30A2	Q9BRI3	323 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	ADAT1	Q9BUB4	502 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	KRTAP2-2	Q9BYT5	123 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	SLC22A4	Q9H015	551 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	SHARPIN	Q9H0F6	387 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	METTL17	Q9H7H0	456 aa	Predicted RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	FN3KRP	Q9HA64	309 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	GPR84	Q9NQS5	396 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	GPR173	Q9NS66	373 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	DDX28	Q9NUL7	540 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	TMEM106B	Q9NUM4	274 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	CHCHD3	Q9NX63	227 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	DCAF16	Q9NXF7	216 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	ZNF319	Q9P2F9	582 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	OR52A1	Q9UKL2	312 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	KCNS2	Q9ULS6	477 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	SLC22A13	Q9Y226	551 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	NOP16	Q9Y3C1	178 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	RHBDD3	Q9Y3P4	386 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	RPL36	Q9Y3U8	105 aa	Known RBP	3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	WIPI2	Q9Y4P8	454 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	PPIAL4A	Q9Y536	164 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	PCDHGB1	Q9Y5G3	927 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	SNX5	Q9Y5X3	404 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	NPTN	Q9Y639	398 aa		3.9	□□□□□ -1.79
ATXN3-222	ENST00000553570	OTOG	Q6ZRI0	2925 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	ACOD1	A6NK06	481 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	PRR32	B1ATL7	298 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570		B4DSR2	109 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	ZNF732	B4DXR9	585 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	TMEM178B	H3BS89	294 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	SYT7	O43581	403 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	CD5L	O43866	347 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	FADS2	O95864	444 aa	Known RBP	3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	PNP	P00491	289 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	SERPINA3	P01011	423 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	NRAS	P01111	189 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	GYPA	P02724	150 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	CD55	P08174	381 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	DBT	P11182	482 aa	Known RBP	3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	RPS2	P15880	293 aa	Known RBP	3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	HNF1A	P20823	631 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	CD80	P33681	288 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	PMEL	P40967	661 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	GABRA2	P47869	451 aa		3.89	□□□□□ -1.79
ATXN3-222	ENST00000553570	GPM6A	P51674	278 aa		3.89	□□□□□ -1.79

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