RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 GPR157Q5UAW9 335 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 SLC22A25Q6T423 547 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 LIAT1Q6ZQX7 453 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 SPAG16Q8N0X2 631 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 LGI3Q8N145 548 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 CPEB3Q8NE35 698 aaKnown RBP11.14□□□□□ -0.63
SHMT2-205ENST00000553474 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 GTF3AQ92664 365 aaKnown RBP11.14□□□□□ -0.63
SHMT2-205ENST00000553474 PLK3Q9H4B4 646 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 ZC4H2Q9NQZ6 224 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 SLC2A9Q9NRM0 540 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 SLC7A10Q9NS82 523 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 TMED3Q9Y3Q3 217 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 POMT1Q9Y6A1 747 aa11.14□□□□□ -0.63
SHMT2-205ENST00000553474 H7C1Q1 480 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 SS18L1O75177 396 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 ACTL6AO96019 429 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 PLATP00750 562 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 FCGR2CP31995 323 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 FGF12P61328 243 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 HERV-K104P61576 105 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 ARF1P84077 181 aaKnown RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 OR1C1Q15619 314 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 CEACAM21Q3KPI0 293 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 PXDC1Q5TGL8 231 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 LURAP1LQ8IV03 231 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 MKXQ8IYA7 352 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 UBAC2Q8NBM4 344 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 FER1L6-AS2Q96M78 137 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 RSRP1Q9BUV0 290 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 TTTY12Q9BZ98 90 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 NKX6-2Q9C056 277 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 ZNF442Q9H7R0 627 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 GP6Q9HCN6 339 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 CARHSP1Q9Y2V2 147 aaKnown RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 KLF13Q9Y2Y9 288 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 ZNF705EA8MWA4 302 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 CTXN2P0C2S0 81 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 OPRM1P35372 400 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 SULT1A2P50226 295 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 RRADP55042 308 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 PLP2Q04941 152 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 PJVKQ0ZLH3 352 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 IL13RA2Q14627 380 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 MRPL21Q7Z2W9 205 aaKnown RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 ZDHHC23Q8IYP9 409 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 OR5A2Q8NGI9 324 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 APH1AQ96BI3 265 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 NARS2Q96I59 477 aaKnown RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 C18orf12Q96KH6 178 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 SIGLEC12Q96PQ1 595 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 LIME1Q9H400 295 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 RIMS4Q9H426 269 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 RHOFQ9HBH0 211 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 SPACA1Q9HBV2 294 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 PRR13Q9NZ81 148 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 COQ3Q9NZJ6 369 aa11.13□□□□□ -0.63
SHMT2-205ENST00000553474 ZNF629Q9UEG4 869 aaPredicted RBP11.13□□□□□ -0.63
SHMT2-205ENST00000553474 KLRC4-KLRK1H3BQV0 150 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 J3QW42 95 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 KCNAB3O43448 404 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 OR7C1O76099 320 aaPredicted RBP11.12□□□□□ -0.63
SHMT2-205ENST00000553474 GLAP06280 429 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 DUSP1P28562 367 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 DEFA5Q01523 94 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 TMEM268Q5VZI3 342 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 SLC25A26Q70HW3 274 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 CALHM1Q8IU99 346 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 TUSC5Q8IXB3 177 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 TOMM40LQ969M1 308 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 CYYR1Q96J86 154 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 PAPOLGQ9BWT3 736 aaKnown RBP11.12□□□□□ -0.63
SHMT2-205ENST00000553474 SEC11CQ9BY50 192 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 PRRG4Q9BZD6 226 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 PARP11Q9NR21 331 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 RCC2Q9P258 522 aaKnown RBP11.12□□□□□ -0.63
SHMT2-205ENST00000553474 CACNA1AO00555 2505 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 NCOR2Q9Y618 2525 aa11.12□□□□□ -0.63
SHMT2-205ENST00000553474 KIR2DS1A0A191URI9 304 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 DUXBA0A1W2PPF3 345 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 ABCD4O14678 606 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 DIRAS3O95661 229 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 CDS2O95674 445 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 PPYP01298 95 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 OR5AC1P0C628 307 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-205ENST00000553474 ITGA3P26006 1051 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 KIR2DS4P43632 304 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 P2RY1P47900 373 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 CAV2P51636 162 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 RND3P61587 244 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 PRDX4Q13162 271 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 KIR2DS1Q14954 304 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 BHLHE23Q8NDY6 225 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 OR56B2PQ8NGI1 322 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 MRPL24Q96A35 216 aaKnown RBP11.11□□□□□ -0.63
SHMT2-205ENST00000553474 MSI2Q96DH6 328 aaKnown RBP11.11□□□□□ -0.63
SHMT2-205ENST00000553474 ABHD14BQ96IU4 210 aa11.11□□□□□ -0.63
SHMT2-205ENST00000553474 TSNAXQ99598 290 aaKnown RBP11.11□□□□□ -0.63
SHMT2-205ENST00000553474 ASCL3Q9NQ33 180 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms