RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 GSTK1Q9Y2Q3 226 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 IGKV1-9A0A0C4DH69 117 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 MEGF11A6BM72 1044 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 J3QLW9 94 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 SIRPB1O00241 398 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 PSPNO60542 156 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 ALPLP05186 524 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF19P17023 458 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 HTR1DP28221 377 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 BRS3P32247 399 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 ALDH3A2P51648 485 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 P2RX3P56373 397 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 KPNB1Q14974 876 aaKnown RBP10.28□□□□□ -0.76
LINC00643-202ENST00000553426 NSUN5P1Q3KNT7 163 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 ZFP1Q6P2D0 407 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 RTN4RL2Q86UN3 420 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 Q8N2B8 174 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 OR4F17Q8NGA8 305 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 STMN2Q93045 179 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 CREB3L1Q96BA8 519 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 Q96MT0 163 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 OR4F4Q96R69 305 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 IL36RNQ9UBH0 155 aa10.28□□□□□ -0.76
LINC00643-202ENST00000553426 EI24O14681 340 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 MPZL2O60487 215 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 OR2H2O95918 312 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 MT-ND2P03891 347 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 CALCBP10092 127 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 ZNF44P15621 663 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 VDAC2P45880 294 aaPredicted RBP10.27□□□□□ -0.77
LINC00643-202ENST00000553426 OR3A1P47881 315 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 NANOS3P60323 173 aaKnown RBP10.27□□□□□ -0.77
LINC00643-202ENST00000553426 SCN1BQ07699 218 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 MRPL28Q13084 256 aaKnown RBP10.27□□□□□ -0.77
LINC00643-202ENST00000553426 ALKBH1Q13686 389 aaKnown RBP10.27□□□□□ -0.77
LINC00643-202ENST00000553426 HABP2Q14520 560 aaPredicted RBP10.27□□□□□ -0.77
LINC00643-202ENST00000553426 ZIK1Q3SY52 487 aaPredicted RBP10.27□□□□□ -0.77
LINC00643-202ENST00000553426 CCBE1Q6UXH8 406 aaPredicted RBP10.27□□□□□ -0.77
LINC00643-202ENST00000553426 TCF23Q7RTU1 214 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 NDUFA11Q86Y39 141 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 SAXO1Q8IYX7 474 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 ABHD12Q8N2K0 398 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 CHST4Q8NCG5 386 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 OR5D14Q8NGL3 314 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 OR13C9Q8NGT0 318 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 RFT1Q96AA3 541 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 CPNE2Q96FN4 548 aaPredicted RBP10.27□□□□□ -0.77
LINC00643-202ENST00000553426 C4orf36Q96KX1 117 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 OR5M11Q96RB7 305 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 ZCCHC4Q9H5U6 513 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 SERTAD4Q9NUC0 356 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 TAS2R3Q9NYW6 316 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.27□□□□□ -0.77
LINC00643-202ENST00000553426 DPM3Q9P2X0 92 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 GMPPBQ9Y5P6 360 aa10.27□□□□□ -0.77
LINC00643-202ENST00000553426 LEUTXA8MZ59 168 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 G3V4G9 280 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 J3QRE1 110 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 TOR1AO14656 332 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 KDM4BO94953 1096 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 FADS2O95864 444 aaKnown RBP10.26□□□□□ -0.77
LINC00643-202ENST00000553426 HCKP08631 526 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 TMEM225BP0DP42 221 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 CD28P10747 220 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 CDK2P24941 298 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 CEACAM3P40198 252 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 LDLRAD2Q5SZI1 272 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 HEPN1Q6WQI6 88 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 C16orf82Q7Z2V1 217 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 REC114Q7Z4M0 266 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 SERPINA12Q8IW75 414 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 OR4D6Q8NGJ1 314 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 OR5D18Q8NGL1 313 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 R3HDM4Q96D70 268 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 PELI1Q96FA3 418 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 ALG8Q9BVK2 526 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 COMMD4Q9H0A8 199 aa10.26□□□□□ -0.77
LINC00643-202ENST00000553426 EXOGQ9Y2C4 368 aaKnown RBP10.26□□□□□ -0.77
LINC00643-202ENST00000553426 OR4C45A6NMZ5 311 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 DEGS1O15121 323 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 MAGEB3O15480 346 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 CSN2P05814 226 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 CCDC159P0C7I6 412 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 DBTP11182 482 aaKnown RBP10.25□□□□□ -0.77
LINC00643-202ENST00000553426 LMO1P25800 156 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 PTGFRP43088 359 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 PRRX1P54821 245 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 BLCAPP62952 87 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 BDH1Q02338 343 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 AESQ08117 197 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 GALEQ14376 348 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 KRBOX4Q5JUW0 171 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 PRAMEF5Q5TYX0 476 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 LHFPL3Q86UP9 236 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 LYG1Q8N1E2 194 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 SYS1Q8N2H4 156 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 CBR4Q8N4T8 237 aa10.25□□□□□ -0.77
LINC00643-202ENST00000553426 OR51A4Q8NGJ6 313 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms