RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TAS2R43P59537 309 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 SLC35A2P78381 396 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 RBM48Q5RL73 367 aaKnown RBP9.63□□□□□ -0.87
CKAP4-202ENST00000552828 UTS2BQ765I0 119 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 OR5D14Q8NGL3 314 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 OR4C13Q8NGP0 309 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 TRMT10AQ8TBZ6 339 aaKnown RBP9.63□□□□□ -0.87
CKAP4-202ENST00000552828 RPS4Y2Q8TD47 263 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 GPR148Q8TDV2 347 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 TSEN15Q8WW01 171 aaKnown RBP9.63□□□□□ -0.87
CKAP4-202ENST00000552828 AQP3Q92482 292 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 SMIM19Q96E16 107 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 MND1Q9BWT6 205 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 RBM38Q9H0Z9 239 aaKnown RBP9.63□□□□□ -0.87
CKAP4-202ENST00000552828 NEK6Q9HC98 313 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 RAB18Q9NP72 206 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 NLKQ9UBE8 527 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 ZNF222Q9UK12 451 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 BLOC1S6Q9UL45 172 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 FOXJ3Q9UPW0 622 aa9.63□□□□□ -0.87
CKAP4-202ENST00000552828 SIRT4Q9Y6E7 314 aaPredicted RBP9.63□□□□□ -0.87
CKAP4-202ENST00000552828 IGKV1D-17A0A075B6S4 117 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 A0A1W2PQ09 198 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 TRIM64CA6NLI5 447 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 OR2AT4A6NND4 320 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 J3QT63 122 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 AKR7A2O43488 359 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 RHBDL1O75783 438 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 LALBAP00709 142 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 TFF1P04155 84 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 CD2P06729 351 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 NDUFB7P17568 137 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 ATF1P18846 271 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 GLRA1P23415 457 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 CRHBPP24387 322 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 GMFBP60983 142 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 LRRC75BQ2VPJ9 315 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 KCTD21Q4G0X4 260 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 HIST2H2BDQ6DRA6 164 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 DMKNQ6E0U4 476 aaPredicted RBP9.62□□□□□ -0.87
CKAP4-202ENST00000552828 LIAT1Q6ZQX7 453 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 SERPINA12Q8IW75 414 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 PARP16Q8N5Y8 322 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 DTX3Q8N9I9 347 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 DNAAF1Q8NEP3 725 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 OR2T6Q8NHC8 308 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 PIFOQ8TCI5 191 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 GHSRQ92847 366 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 SPSB1Q96BD6 273 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 BORCS8Q96FH0 119 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 SDSLQ96GA7 329 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 ZCCHC4Q9H5U6 513 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 PAK1IP1Q9NWT1 392 aaPredicted RBP9.62□□□□□ -0.87
CKAP4-202ENST00000552828 POLDIP2Q9Y2S7 368 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 NOTCH3Q9UM47 2321 aa9.62□□□□□ -0.87
CKAP4-202ENST00000552828 PSG2P11465 335 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 MPZP25189 248 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 AZGP1P25311 298 aaKnown RBP9.61□□□□□ -0.87
CKAP4-202ENST00000552828 ALDH3B2P48448 385 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 RBP2P50120 134 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 ATP1B3P54709 279 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 MTCP1P56278 107 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 BDH1Q02338 343 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 SPHARQ15513 63 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 YIF1BQ5BJH7 314 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 SATL1Q86VE3 508 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 ANGPTL5Q86XS5 388 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 C11orf42Q8N5U0 333 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 KLHDC1Q8N7A1 406 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 ZFP41Q8N8Y5 198 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 ZNRF1Q8ND25 227 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 OR13C9Q8NGT0 318 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 RGP1Q92546 391 aaPredicted RBP9.61□□□□□ -0.87
CKAP4-202ENST00000552828 SGCDQ92629 289 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 OPALINQ96PE5 141 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 YTHDF1Q9BYJ9 559 aaKnown RBP9.61□□□□□ -0.87
CKAP4-202ENST00000552828 PKIBQ9C010 78 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 CCDC90BQ9GZT6 254 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 RASL12Q9NYN1 266 aa9.61□□□□□ -0.87
CKAP4-202ENST00000552828 TET2Q6N021 2002 aaPredicted RBP9.61□□□□□ -0.87
CKAP4-202ENST00000552828 IGKV1-27A0A075B6S5 117 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 IGKV1-9A0A0C4DH69 117 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 PIN1P1O15428 100 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 SYNGR1O43759 233 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 ANGPTL7O43827 346 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 CHST1O43916 411 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 NOS1APO75052 506 aaPredicted RBP9.6□□□□□ -0.87
CKAP4-202ENST00000552828 ALX3O95076 343 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 PRB2P02812 416 aaPredicted RBP9.6□□□□□ -0.87
CKAP4-202ENST00000552828 MT-ND2P03891 347 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 CD1AP06126 327 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 PGA5P0DJD9 388 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 CELP19835 753 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 SOX2P48431 317 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 IL24Q13007 206 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 IRF3Q14653 427 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 MED22Q15528 200 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 FAM189A2Q15884 450 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 LY6EQ16553 131 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 LHFPL2Q6ZUX7 228 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms