RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 SERPINA1P01009 418 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 IGHG2P01859 326 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 HNRNPCP07910 306 aaKnown RBP eCLIP4.17□□□□□ -1.74
HOXB3-213ENST00000552000 H2BFMP0C1H6 154 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 IGHV4-30-4P0DP06 118 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 CLUP10909 449 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 OPRL1P41146 370 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 MNDAP41218 407 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 HAAOP46952 286 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 CDX1P47902 265 aaPredicted RBP4.17□□□□□ -1.74
HOXB3-213ENST00000552000 POU3F4P49335 361 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 MEF2CQ06413 473 aaPredicted RBP4.17□□□□□ -1.74
HOXB3-213ENST00000552000 KLF10Q13118 480 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 GPR50Q13585 617 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 TRIM25Q14258 630 aaKnown RBP4.17□□□□□ -1.74
HOXB3-213ENST00000552000 HES1Q14469 280 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 RBM39Q14498 530 aaKnown RBP4.17□□□□□ -1.74
HOXB3-213ENST00000552000 HNF4GQ14541 408 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 PNLIPRP3Q17RR3 467 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 TEX30Q5JUR7 227 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 TPTE2P1Q5T6R2 138 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 TRAPPC6BQ86SZ2 158 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 ZNF429Q86V71 674 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 ERI1Q8IV48 349 aaKnown RBP4.17□□□□□ -1.74
HOXB3-213ENST00000552000 LYSMD2Q8IV50 215 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 FOXRED2Q8IWF2 684 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 FAM86B1Q8N7N1 296 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 C5orf56Q8N8D9 126 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 SLC37A3Q8NCC5 494 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 OR11H1Q8NG94 326 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 OR8B12Q8NGG6 310 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 OR5A2Q8NGI9 324 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 OR56B4Q8NH76 319 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 ZNF596Q8TC21 504 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 C4orf3Q8WVX3 66 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 LINC00476Q8WZB0 136 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 FUZQ9BT04 418 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 CHST6Q9GZX3 395 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 GHITMQ9H3K2 345 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 VIPAS39Q9H9C1 493 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 CMTM6Q9NX76 183 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 NDUFAF4Q9P032 175 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 LINC00312Q9Y6C7 94 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 SRRM2Q9UQ35 2752 aaKnown RBP4.17□□□□□ -1.74
HOXB3-213ENST00000552000 FAT2Q9NYQ8 4349 aa4.17□□□□□ -1.74
HOXB3-213ENST00000552000 DMBT1Q9UGM3 2413 aaPredicted RBP4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A18PA6NE21 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A16PA6NEW6 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A20PA6NIJ5 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A9PA6NNJ1 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A12PA8MX19 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A5PA8MXJ8 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 AP4M1O00189 453 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 CCRL2O00421 344 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FGF16O43320 207 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 LY6G6CO95867 125 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 IGLV1-47P01700 117 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 IFNA6P05013 189 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 ELANEP08246 267 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A15PP0C7V4 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A13PP0C7W8 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A14PP0C7W9 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM90A24PP0C7X0 464 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM106CPP0CH98 169 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 TMEM11P17152 192 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 SPI1P17947 270 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 CDK2P24941 298 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 CEACAM3P40198 252 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 GSSP48637 474 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 GABPB1Q06547 395 aaPredicted RBP4.16□□□□□ -1.74
HOXB3-213ENST00000552000 RIPPLY1Q0D2K3 151 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FOXE3Q13461 319 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 CRMP1Q14194 572 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 GRK1Q15835 563 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 HLA-DRB5Q30154 266 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 LINC01590Q5TEZ4 76 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 ASPHD1Q5U4P2 390 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 CCDC144NLQ6NUI1 221 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 ASRGL1Q7L266 308 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 CROCCP2Q86T23 111 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 RTN4RL2Q86UN3 420 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 SATL1Q86VE3 508 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 COMMD2Q86X83 199 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 ZNF573Q86YE8 665 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.16□□□□□ -1.74
HOXB3-213ENST00000552000 OR52L1Q8NGH7 329 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 OR52N4Q8NGI2 321 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 OR1N2Q8NGR9 330 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 IL17DQ8TAD2 202 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 DCUN1D4Q92564 292 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 FAM162AQ96A26 154 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 RPEQ96AT9 228 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 SNX22Q96L94 193 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 OR5B12Q96R08 314 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 INTS14Q96SY0 518 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 NMNAT2Q9BZQ4 307 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 EGLN3Q9H6Z9 239 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 NIPAL2Q9H841 368 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 ZNF286AQ9HBT8 521 aa4.16□□□□□ -1.74
HOXB3-213ENST00000552000 HES4Q9HCC6 221 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms