RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 KMT2AQ03164 3969 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 TRBV9A0A0B4J1U6 114 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 GOLGA6L10A6NI86 522 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 LYRM9A8MSI8 78 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 C12orf71A8MTZ7 269 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 FAM220BPB1ANY3 271 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 GOLGA6L19H0YKK7 550 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 M0R1B8 84 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 TP53I11O14683 189 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 AGPAT2O15120 278 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 LYPLA1O75608 230 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-208ENST00000551691 REM1O75628 298 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 CBR3O75828 277 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 MPZL1O95297 269 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 FARS2O95363 451 aaKnown RBP2.85□□□□□ -1.95
LIMA1-208ENST00000551691 PAHP00439 452 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 NPPAP01160 153 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 HLA-HP01893 362 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 IGKV3-11P04433 115 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 IFNW1P05000 195 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 CRYGCP07315 174 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 CT62P0C5K7 136 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 SLC35G6P0C7Q6 338 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 HPGDP15428 266 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 SRMP19623 302 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 PMCHP20382 165 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 IMPA1P29218 277 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 RPL22P35268 128 aaKnown RBP2.85□□□□□ -1.95
LIMA1-208ENST00000551691 ITIH4Q14624 930 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 ATP6AP1Q15904 470 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 NNATQ16517 81 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 GSG1Q2KHT4 349 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 TIMM50Q3ZCQ8 353 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 HIGD2BQ4VC39 106 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 OR2B11Q5JQS5 317 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 KLF17Q5JT82 389 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-208ENST00000551691 LY6G6FQ5SQ64 297 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 C1orf146Q5VVC0 180 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 GPR107Q5VW38 600 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 STUMQ69YW2 141 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 PTRHD1Q6GMV3 140 aaKnown RBP2.85□□□□□ -1.95
LIMA1-208ENST00000551691 CNIH2Q6PI25 160 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 TMIGD1Q6UXZ0 262 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 SLC25A48Q6ZT89 311 aaKnown RBP2.85□□□□□ -1.95
LIMA1-208ENST00000551691 PEX26Q7Z412 305 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 RDH10Q8IZV5 341 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 PUSL1Q8N0Z8 303 aaKnown RBP2.85□□□□□ -1.95
LIMA1-208ENST00000551691 FAM58AQ8N1B3 248 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 Q8N377 158 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 ASCC1Q8N9N2 400 aaKnown RBP2.85□□□□□ -1.95
LIMA1-208ENST00000551691 OR1S2Q8NGQ3 325 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 OR13C9Q8NGT0 318 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 OR9G1Q8NH87 305 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 NUBPLQ8TB37 319 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 NT5CQ8TCD5 201 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 RAB1CQ92928 201 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 APH1AQ96BI3 265 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 HAUS1Q96CS2 278 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 ASB9Q96DX5 294 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 OR5B12Q96R08 314 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 RARRES2Q99969 163 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 SOSTQ9BQB4 213 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 ACTR3CQ9C0K3 210 aaPredicted RBP2.85□□□□□ -1.95
LIMA1-208ENST00000551691 OR51M1Q9H341 326 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 GAL3ST2Q9H3Q3 398 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 TMEM165Q9HC07 324 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 ASIC3Q9UHC3 531 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 ING4Q9UNL4 249 aa2.85□□□□□ -1.95
LIMA1-208ENST00000551691 ALMS1Q8TCU4 4167 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 C5orf63A6NC05 138 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 E9PQ18 207 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 ATP6V1G2-DDX39BF2Z307 99 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 GOLGA8MH3BSY2 632 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 CHST1O43916 411 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 SS18L1O75177 396 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 NIPSNAP2O75323 286 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 PSIP1O75475 530 aaKnown RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 SNAPINO95295 136 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 AIFM1O95831 613 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 TSPAN13O95857 204 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 TBX6O95947 436 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 SERPINA5P05154 406 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 IGLL1P15814 213 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF17P17021 662 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 NPR2P20594 1047 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 CCNOP22674 350 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 TUBG1P23258 451 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 FMO3P31513 532 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 DEKP35659 375 aaKnown RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 VDAC2P45880 294 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 TFPI2P48307 235 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 CRIP2P52943 208 aaPredicted RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 SUB1P53999 127 aaKnown RBP eCLIP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 HADHBP55084 474 aaKnown RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 RAB38P57729 211 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 GPX6P59796 221 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 STXBP1P61764 594 aaKnown RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 IRF8Q02556 426 aa2.84□□□□□ -1.95
LIMA1-208ENST00000551691 PDIA2Q13087 525 aaKnown RBP2.84□□□□□ -1.95
LIMA1-208ENST00000551691 PIGHQ14442 188 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms