RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 AK6Q9Y3D8 172 aaKnown RBP13.43□□□□□ -0.26
CHMP1A-209ENST00000550872 AUP1Q9Y679 476 aa13.43□□□□□ -0.26
CHMP1A-209ENST00000550872 TMEM82A0PJX8 343 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 K7N7A8 449 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 DEGS1O15121 323 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 ZNF737O75373 536 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 CRLF1O75462 422 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 OR2H2O95918 312 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 AVPP01185 164 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 PPIAL4GP0DN37 164 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 JUNBP17275 347 aaPredicted RBP13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 GABRR1P24046 479 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 MYL9P24844 172 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 PAX8Q06710 450 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 PDCD1Q15116 288 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 CHRFAM7AQ494W8 412 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 C1orf100Q5SVJ3 147 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 OSR2Q8N2R0 312 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 OR51T1Q8NGJ9 327 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 OR5D13Q8NGL4 314 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 PPP1R35Q8TAP8 253 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 TBC1D15Q8TC07 691 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 OR51E2Q9H255 320 aa13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 TXNL4BQ9NX01 149 aaKnown RBP13.42□□□□□ -0.26
CHMP1A-209ENST00000550872 JMJD1CQ15652 2540 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 TRAV1-2A0A0B4J238 106 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 A0A1W2PP11 408 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 PDCD5O14737 125 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 GTF2F2P13984 249 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 GADD45AP24522 165 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 HTR2CP28335 458 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 FGF9P31371 208 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 SRP14P37108 136 aaKnown RBP13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 IL13RA2Q14627 380 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 PIGYQ3MUY2 71 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 Q6P435 159 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 C1orf229Q6ZS94 237 aaPredicted RBP13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 GFI1Q99684 422 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 CHCHD6Q9BRQ6 235 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 PLGRKTQ9HBL7 147 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 OPN4Q9UHM6 478 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 ST3GAL6Q9Y274 331 aa13.41□□□□□ -0.26
CHMP1A-209ENST00000550872 TRBV23-1A0A0A0MS06 115 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 A0A1W2PQ09 198 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 PSPNO60542 156 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 SMIM18P0DKX4 95 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 CD37P11049 281 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 LMO1P25800 156 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 PSMD7P51665 324 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 EDDM3BP56851 147 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 ARF6P62330 175 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 GRK1Q15835 563 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 C17orf107Q6ZR85 190 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 GDPD3Q7L5L3 318 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 FAM185AQ8N0U4 392 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 OR8H2Q8N162 312 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 TEX29Q8N6K0 151 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 CHST4Q8NCG5 386 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 LY6G5BQ8NDX9 201 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 OR4S1Q8NGB4 309 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 OR4M1Q8NGD0 313 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 OR6M1Q8NGM8 313 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 C8orf46Q8TAG6 207 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 C1orf147Q96MC9 270 aaPredicted RBP13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 CHST6Q9GZX3 395 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 BANF2Q9H503 90 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 GHRLQ9UBU3 117 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 V9GY05 133 aa13.4□□□□□ -0.26
CHMP1A-209ENST00000550872 A0A0G2JK05 382 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 LOC100506127A0A0U1RQW1 187 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 SHISA3A0PJX4 238 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 SLC17A2O00624 439 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 CRTAPO75718 401 aaPredicted RBP13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 UBBP0CG47 229 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 RBM11P57052 281 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 RPL31P62899 125 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 NHLRC3Q5JS37 347 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 NANPQ8TBE9 248 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 MRPS24Q96EL2 167 aaKnown RBP13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 DMRTB1Q96MA1 342 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 C19orf12Q9NSK7 152 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 ONECUT1Q9UBC0 465 aa13.39□□□□□ -0.27
CHMP1A-209ENST00000550872 DNHD1Q96M86 4753 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 SLC33A1O00400 549 aaPredicted RBP13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 MGST3O14880 152 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 GEMIN2O14893 280 aaKnown RBP13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 SLC22A1O15245 554 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 OR7C1O76099 320 aaPredicted RBP13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 MGMTP16455 207 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 SRD5A1P18405 259 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 RAB3BP20337 219 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 OR3A1P47881 315 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 EDDM3AQ14507 147 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 P2RY14Q15391 338 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 RAB11BQ15907 218 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 TAF9Q16594 264 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 TIMM50Q3ZCQ8 353 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 PAN3Q58A45 887 aaKnown RBP13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 METTL11BQ5VVY1 283 aa13.38□□□□□ -0.27
CHMP1A-209ENST00000550872 CMTM4Q8IZR5 234 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms