RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 OR52W1Q6IF63 320 aa17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 HEPN1Q6WQI6 88 aa17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 UTS2BQ765I0 119 aa17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 ZDHHC13Q8IUH4 622 aa17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 ZNF596Q8TC21 504 aa17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 STMN2Q93045 179 aa17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 GAL3ST2Q9H3Q3 398 aa17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 HMG20AQ9NP66 347 aa17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 GLS2Q9UI32 602 aa17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 TSSC4Q9Y5U2 329 aaPredicted RBP17.32■□□□□ 0.36
SMARCC2-210ENST00000550519 TCRBV4S1A1TA0A5B7 111 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 MPIG6BO95866 241 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 LPLP06858 475 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 ATF1P18846 271 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 PRKACBP22694 351 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 CDK2P24941 298 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 CD34P28906 385 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 SNU13P55769 128 aaKnown RBP17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 ZNF85Q03923 595 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 PDZK1IP1Q13113 114 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 TMED1Q13445 227 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 ABCA11PQ4W5N1 156 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 TMEM244Q5VVB8 128 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 CCDC121Q6ZUS5 278 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 MYDGFQ969H8 173 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 CIB1Q99828 191 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 SLC25A33Q9BSK2 321 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 TAS2R3Q9NYW6 316 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 GNG8Q9UK08 70 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 HHLA2Q9UM44 414 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 NBEAL2Q6ZNJ1 2754 aa17.31■□□□□ 0.36
SMARCC2-210ENST00000550519 TRGV10A0A0A0MS01 117 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 LEUTXA8MZ59 168 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 K7EIL1 84 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 SIRPB1O00241 398 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 SH2D1BO14796 132 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 OR2F2O95006 317 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 OR2H2O95918 312 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 AMY1AP04745 511 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 AMY2AP04746 511 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 LMO1P25800 156 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 ATP6V1E1P36543 226 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 TP53I3Q53FA7 332 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 LHFPL2Q6ZUX7 228 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 FAM220AQ7Z4H9 259 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 OR8J1Q8NGP2 316 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 OR2G2Q8NGZ5 317 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 CAPSLQ8WWF8 208 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 EME1Q96AY2 570 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 FGGYQ96C11 551 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 RBM14Q96PK6 669 aaKnown RBP17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 EXOSC4Q9NPD3 245 aaKnown RBP17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 GSTK1Q9Y2Q3 226 aa17.3■□□□□ 0.36
SMARCC2-210ENST00000550519 IGKV1-12A0A0C4DH73 117 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 FUOMA2VDF0 154 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 IGKV1D-12P01611 117 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 PF4P02776 101 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 ISG15P05161 165 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 FASP25445 335 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 GDNFP39905 211 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 GLIPR1P48060 266 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 ARHGDIBP52566 201 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 SLC35A2P78381 396 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 AMIGO2Q86SJ2 522 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 SPSB1Q96BD6 273 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 RCC1LQ96I51 464 aaKnown RBP17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 MBOAT4Q96T53 435 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 COMMD4Q9H0A8 199 aa17.29■□□□□ 0.36
SMARCC2-210ENST00000550519 KDM4BO94953 1096 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 AESQ08117 197 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 HLA-DRB5Q30154 266 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 C10orf99Q6UWK7 81 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 OR4X2Q8NGF9 303 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 RFKQ969G6 155 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 OPALINQ96PE5 141 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 GABARAPL3Q9BY60 117 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 ZNF286AQ9HBT8 521 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 FRRS1LQ9P0K9 344 aa17.28■□□□□ 0.36
SMARCC2-210ENST00000550519 FAM172BPA6NC97 362 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 LY6LH3BQJ8 138 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 BUB1B-PAK6H3BSN5 160 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 CSN2P05814 226 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 ZNF20P17024 532 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 VAX1Q5SQQ9 334 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 TPTE2P1Q5T6R2 138 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 FDX2Q6P4F2 183 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 RFT1Q96AA3 541 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 CREB3L1Q96BA8 519 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 INPP5EQ9NRR6 644 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 AP4S1Q9Y587 144 aa17.27■□□□□ 0.36
SMARCC2-210ENST00000550519 A0A087X0M5 115 aa17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 A0A1B0GX30 115 aa17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 ODAMA1E959 279 aa17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 SH2D7A6NKC9 451 aaPredicted RBP17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 DUS4LO95620 317 aaKnown RBP17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 MT-ND2P03891 347 aa17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 CEACAM3P40198 252 aa17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 NANOS3P60323 173 aaKnown RBP17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 KPNB1Q14974 876 aaKnown RBP17.26■□□□□ 0.35
SMARCC2-210ENST00000550519 RNF144BQ7Z419 303 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms