RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 HUWE1Q7Z6Z7 4374 aaKnown RBP9.82□□□□□ -0.84
DDX54-206ENST00000549271 SLC1A7O00341 560 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 CHST1O43916 411 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 DUS4LO95620 317 aaKnown RBP9.81□□□□□ -0.84
DDX54-206ENST00000549271 CLIC3O95833 236 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 FADS2O95864 444 aaKnown RBP9.81□□□□□ -0.84
DDX54-206ENST00000549271 SERPINA3P01011 423 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 ACTA2P62736 377 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 ACTG2P63267 376 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 SLC35A2P78381 396 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 DCTN2Q13561 401 aaKnown RBP9.81□□□□□ -0.84
DDX54-206ENST00000549271 HABP2Q14520 560 aaPredicted RBP9.81□□□□□ -0.84
DDX54-206ENST00000549271 LRRC36Q1X8D7 754 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 KIAA2026Q5HYC2 2103 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 RNF144BQ7Z419 303 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 SYS1Q8N2H4 156 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 DNAAF1Q8NEP3 725 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 ZNF555Q8NEP9 628 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 STMN2Q93045 179 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 SLAMF9Q96A28 289 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 ZNF702PQ9H963 129 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 FGF20Q9NP95 211 aaPredicted RBP9.81□□□□□ -0.84
DDX54-206ENST00000549271 INPP5EQ9NRR6 644 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 OR14J1Q9UGF5 321 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 HHLA2Q9UM44 414 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 RPL36Q9Y3U8 105 aaKnown RBP9.81□□□□□ -0.84
DDX54-206ENST00000549271 CSMD3Q7Z407 3707 aa9.81□□□□□ -0.84
DDX54-206ENST00000549271 INMTO95050 263 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 LIMS3P0CW19 117 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 LIMS4P0CW20 117 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 HOXD3P31249 432 aaPredicted RBP9.8□□□□□ -0.84
DDX54-206ENST00000549271 NPBWR2P48146 333 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 CAPZA1P52907 286 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 ATP1B3P54709 279 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 ERVFRD-1P60508 538 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 ADARB1P78563 741 aaKnown RBP9.8□□□□□ -0.84
DDX54-206ENST00000549271 ZNF691Q5VV52 312 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 SLC25A26Q70HW3 274 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 MUC7Q8TAX7 377 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 CNIH3Q8TBE1 160 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 BORCS8Q96FH0 119 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 MRPL48Q96GC5 212 aaKnown RBP9.8□□□□□ -0.84
DDX54-206ENST00000549271 CEP19Q96LK0 163 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 JAM3Q9BX67 310 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 WNT10AQ9GZT5 417 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 STARD9Q9P2P6 4700 aa9.8□□□□□ -0.84
DDX54-206ENST00000549271 C17orf98A8MV24 154 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 ANKRD65E5RJM6 399 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 K7N7A8 449 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 ZNF737O75373 536 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 ZFPL1O95159 310 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 RBP4P02753 201 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 MT-ND2P03891 347 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 TK1P04183 234 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 ZNF20P17024 532 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 PRKACBP22694 351 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 AZGP1P25311 298 aaKnown RBP9.79□□□□□ -0.84
DDX54-206ENST00000549271 PEX2P28328 305 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 RBP2P50120 134 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 ETV1P50549 477 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 GTF2A1P52655 376 aaPredicted RBP9.79□□□□□ -0.84
DDX54-206ENST00000549271 DLX6P56179 175 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 MTCP1P56278 107 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 LGALS4P56470 323 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 RCN1Q15293 331 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 CNN3Q15417 329 aaKnown RBP9.79□□□□□ -0.84
DDX54-206ENST00000549271 NKAPLQ5M9Q1 402 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 PACRGLQ8N7B6 248 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 ZNF676Q8N7Q3 588 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 OR4M1Q8NGD0 313 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 OR13C3Q8NGS6 347 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 FOXRED1Q96CU9 486 aaPredicted RBP9.79□□□□□ -0.84
DDX54-206ENST00000549271 MALSU1Q96EH3 234 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 MYCBPQ99417 103 aaPredicted RBP9.79□□□□□ -0.84
DDX54-206ENST00000549271 PDCD1LG2Q9BQ51 273 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 SEBOXQ9HB31 216 aaPredicted RBP9.79□□□□□ -0.84
DDX54-206ENST00000549271 IL36RNQ9UBH0 155 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 TCF19Q9Y242 345 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 TBL2Q9Y4P3 447 aaKnown RBP9.79□□□□□ -0.84
DDX54-206ENST00000549271 PCLOQ9Y6V0 5065 aa9.79□□□□□ -0.84
DDX54-206ENST00000549271 IGKV1-12A0A0C4DH73 117 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 TMEM82A0PJX8 343 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 A6NDX4 124 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 ODF3BA8MYP8 253 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 IGKV1D-12P01611 117 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 CHRM2P08172 466 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 CCL3L1P16619 93 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 BCL3P20749 454 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 PAX6P26367 422 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 DYNLT3P51808 116 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 BMXP51813 675 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 GBX2P52951 348 aaPredicted RBP9.78□□□□□ -0.84
DDX54-206ENST00000549271 CD83Q01151 205 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 MRPL28Q13084 256 aaKnown RBP9.78□□□□□ -0.84
DDX54-206ENST00000549271 PDZK1IP1Q13113 114 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 ZNF273Q14593 569 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 TTC23Q5W5X9 447 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 LHFPL2Q6ZUX7 228 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 DHRSXQ8N5I4 330 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 OR11H6Q8NGC7 330 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms