RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 AP3M1Q9Y2T2 418 aa1.07□□□□□ -2.24
CCDC38-206ENST00000548771 FADS3Q9Y5Q0 445 aa1.07□□□□□ -2.24
CCDC38-206ENST00000548771 WDR19Q8NEZ3 1342 aa1.07□□□□□ -2.24
CCDC38-206ENST00000548771 TMEM131Q92545 1883 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 TRAV8-7A0A075B6U6 113 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 TRGV4A0A0C4DH28 118 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 SLC5A10A0PJK1 596 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 OR2AT4A6NND4 320 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 CASC3O15234 703 aaKnown RBP1.06□□□□□ -2.24
CCDC38-206ENST00000548771 GYG2O15488 501 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 ALOX12BO75342 701 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 CRTAPO75718 401 aaPredicted RBP1.06□□□□□ -2.24
CCDC38-206ENST00000548771 TPM2P07951 284 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 SOD3P08294 240 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 P0DMU3 169 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 FAM231AP0DMU4 169 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 FAM231CP0DMU5 169 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 HOXB8P17481 243 aaPredicted RBP1.06□□□□□ -2.24
CCDC38-206ENST00000548771 MSR1P21757 451 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 PRTN3P24158 256 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 HTR2CP28335 458 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 S100A2P29034 98 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 ARR3P36575 388 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 PEX19P40855 299 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 BNIP2Q12982 314 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 KRTAP21-3Q3LHN1 58 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 NOXRED1Q6NXP6 359 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 GALNT10Q86SR1 603 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 LINC00523Q86TU6 105 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 ARHGAP18Q8N392 663 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 OR8K1Q8NGG5 319 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 KIAA1143Q96AT1 154 aaPredicted RBP1.06□□□□□ -2.24
CCDC38-206ENST00000548771 PYURFQ96I23 114 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 BEX2Q9BXY8 128 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 ULBP1Q9BZM6 244 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 TUBA4BQ9H853 241 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 C12orf4Q9NQ89 552 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 PEF1Q9UBV8 284 aaKnown RBP1.06□□□□□ -2.24
CCDC38-206ENST00000548771 C14orf166Q9Y224 244 aaKnown RBP1.06□□□□□ -2.24
CCDC38-206ENST00000548771 SLC22A14Q9Y267 594 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 TTC41PQ6P2S7 1318 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 DOCK6Q96HP0 2047 aa1.06□□□□□ -2.24
CCDC38-206ENST00000548771 BRD4O60885 1362 aaPredicted RBP1.06□□□□□ -2.24
CCDC38-206ENST00000548771 PLXNA3P51805 1871 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 PLXNB3Q9ULL4 1909 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 NUP205Q92621 2012 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 H0YIV9 168 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 ZNF593O00488 134 aaPredicted RBP1.05□□□□□ -2.24
CCDC38-206ENST00000548771 GATCO43716 136 aaKnown RBP1.05□□□□□ -2.24
CCDC38-206ENST00000548771 POP7O75817 140 aaKnown RBP1.05□□□□□ -2.24
CCDC38-206ENST00000548771 LIPCP11150 499 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 CTLA4P16410 223 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 ZNF22P17026 224 aaPredicted RBP1.05□□□□□ -2.24
CCDC38-206ENST00000548771 GPR4P46093 362 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 DEFB103AP81534 67 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 DOC2AQ14183 400 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 TNXAQ16473 311 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 TAL2Q16559 108 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 Q499Y3 187 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 ACTBL2Q562R1 376 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 HSP90AA4PQ58FG1 418 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 CLEC12AQ5QGZ9 265 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 ERICH5Q6P6B1 374 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 ZNF567Q8N184 647 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 CA13Q8N1Q1 262 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 MFSD8Q8NHS3 518 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 LMX1AQ8TE12 382 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 FAM131CQ96AQ9 280 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 ZNF436Q9C0F3 470 aaPredicted RBP1.05□□□□□ -2.24
CCDC38-206ENST00000548771 CHRNA10Q9GZZ6 450 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 DNAJC27Q9NZQ0 273 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 RBM12B-AS1Q9P1G2 102 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 OR5V1Q9UGF6 321 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 MIA3Q5JRA6 1907 aa1.05□□□□□ -2.24
CCDC38-206ENST00000548771 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 IGKV1D-37A0A075B6S9 117 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 A0A0J9YYE9 177 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 ANKRD20A5PA0PJZ0 165 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 GPR75O95800 540 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 PDYNP01213 254 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 TRBC1P01850 177 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 OPN1SWP03999 348 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 GUSBP08236 651 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 CECR9P0C854 216 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 CGB3P0DN86 165 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 CGB7P0DN87 165 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 ELK4P28324 431 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 P2RY2P41231 377 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 XKP51811 444 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 RAB25P57735 213 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 PSG4Q00888 419 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 SPAG1Q07617 926 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 DYNC1I2Q13409 638 aaKnown RBP1.04□□□□□ -2.24
CCDC38-206ENST00000548771 NXNL2Q5VZ03 156 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 TMEM215Q68D42 235 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 ATPAF2Q8N5M1 289 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 OR2M3Q8NG83 312 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 OR51L1Q8NGJ5 315 aa1.04□□□□□ -2.24
CCDC38-206ENST00000548771 ZNF707Q96C28 371 aaPredicted RBP1.04□□□□□ -2.24
CCDC38-206ENST00000548771 FMC1Q96HJ9 113 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms