RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 SPIN2AQ99865 258 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 SPIN2BQ9BPZ2 258 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 EXPH5Q8NEV8 1989 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 A0A1B0GV90 55 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 FOLR1P15328 257 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 DDTP30046 118 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 TLE4Q04727 773 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 AKR1C8PQ5T2L2 129 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 CPEB2Q7Z5Q1 589 aaKnown RBP20.07■□□□□ 0.8
NPAS3-206ENST00000548645 TMEM252Q8N6L7 170 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 TMEM171Q8WVE6 324 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 LYRM2Q9NU23 88 aaPredicted RBP20.07■□□□□ 0.8
NPAS3-206ENST00000548645 ZNF581Q9P0T4 197 aa20.07■□□□□ 0.8
NPAS3-206ENST00000548645 NCOA6Q14686 2063 aaPredicted RBP20.07■□□□□ 0.8
NPAS3-206ENST00000548645 TRDCB7Z8K6 153 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 M0R135 149 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 TGOLN2O43493 480 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 VAMP2P63027 116 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 HLA-DRB3P79483 266 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 DEFB133Q30KQ1 61 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 OR5C1Q8NGR4 320 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 ZNF799Q96GE5 643 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 PRUNE2Q8WUY3 3088 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 C3orf85A0A1B0GTC6 90 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 LOC102725191A0A1B0GVB3 256 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 AQP7P3A6NL99 342 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 TRGC1P0CF51 173 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 RPL23AP62750 156 aaKnown RBP20.06■□□□□ 0.8
NPAS3-206ENST00000548645 ENDOGQ14249 297 aaKnown RBP20.06■□□□□ 0.8
NPAS3-206ENST00000548645 CLDND2Q8NHS1 167 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 DYRK2Q92630 601 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 FAM210BQ96KR6 192 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 FOXD3Q9UJU5 478 aaPredicted RBP20.06■□□□□ 0.8
NPAS3-206ENST00000548645 RALGAPA1Q6GYQ0 2036 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 ST8SIA5O15466 376 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 ONECUT2O95948 504 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 FABP4P15090 132 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 PNLIPP16233 465 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 OTX1P32242 354 aaPredicted RBP20.06■□□□□ 0.8
NPAS3-206ENST00000548645 RSPO1Q2MKA7 263 aaPredicted RBP20.06■□□□□ 0.8
NPAS3-206ENST00000548645 C20orf196Q8IYI0 205 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 SUMF1Q8NBK3 374 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 METTL7AQ9H8H3 244 aa20.06■□□□□ 0.8
NPAS3-206ENST00000548645 IGLV3-32A0A0A0MS00 114 aa20.05■□□□□ 0.8
NPAS3-206ENST00000548645 FAM221AA4D161 298 aa20.05■□□□□ 0.8
NPAS3-206ENST00000548645 RNF224P0DH78 156 aa20.05■□□□□ 0.8
NPAS3-206ENST00000548645 C1orf87Q8N0U7 546 aa20.05■□□□□ 0.8
NPAS3-206ENST00000548645 NFAM1Q8NET5 270 aaPredicted RBP20.05■□□□□ 0.8
NPAS3-206ENST00000548645 MEGF10Q96KG7 1140 aa20.05■□□□□ 0.8
NPAS3-206ENST00000548645 MPPED1O15442 326 aa20.05■□□□□ 0.8
NPAS3-206ENST00000548645 RNASE11Q8TAA1 199 aaKnown RBP20.05■□□□□ 0.8
NPAS3-206ENST00000548645 SPTSSAQ969W0 71 aa20.05■□□□□ 0.8
NPAS3-206ENST00000548645 ABHD14BQ96IU4 210 aa20.05■□□□□ 0.8
NPAS3-206ENST00000548645 TMEM222Q9H0R3 208 aa20.05■□□□□ 0.8
NPAS3-206ENST00000548645 SSSCA1O60232 199 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 AADACP22760 399 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 ZNF100Q8IYN0 542 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 FAM185AQ8N0U4 392 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 OR10AD1Q8NGE0 317 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 FRZBQ92765 325 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 HIPK2Q9H2X6 1198 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 TRBV11-1A0A0K0K1C0 115 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 PROB1E7EW31 1015 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 CNN3Q15417 329 aaKnown RBP20.04■□□□□ 0.8
NPAS3-206ENST00000548645 DPPA3Q6W0C5 159 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 CARFQ8N187 725 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 OR10G4Q8NGN3 311 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 ABHD5Q8WTS1 349 aa20.04■□□□□ 0.8
NPAS3-206ENST00000548645 PTRH2Q9Y3E5 179 aaKnown RBP20.04■□□□□ 0.8
NPAS3-206ENST00000548645 SPTBN5Q9NRC6 3674 aaKnown RBP20.04■□□□□ 0.8
NPAS3-206ENST00000548645 A0A087X0M5 115 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 A0A1B0GX30 115 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 NOVA1P51513 510 aaKnown RBP20.03■□□□□ 0.8
NPAS3-206ENST00000548645 DYNLT3P51808 116 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 OR1D5P58170 312 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 BRICD5Q6PL45 260 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 ANKRD37Q7Z713 158 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 ZNF695Q8IW36 515 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 CD207Q9UJ71 328 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 UBE2J1Q9Y385 318 aaPredicted RBP20.03■□□□□ 0.8
NPAS3-206ENST00000548645 RTTNQ86VV8 2226 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 GEMIN2O14893 280 aaKnown RBP20.03■□□□□ 0.8
NPAS3-206ENST00000548645 HIST1H3AP68431 136 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 C10orf128Q5T292 105 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 CMTM1Q8IZ96 169 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 GLRX2Q9NS18 164 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 PLEK2Q9NYT0 353 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 CEACAM1P13688 526 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 PTGDSP41222 190 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 BAXQ07812 192 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 SHBQ15464 509 aa20.03■□□□□ 0.8
NPAS3-206ENST00000548645 SLC31A2O15432 143 aa20.02■□□□□ 0.8
NPAS3-206ENST00000548645 SNAI3Q3KNW1 292 aa20.02■□□□□ 0.8
NPAS3-206ENST00000548645 STX12Q86Y82 276 aa20.02■□□□□ 0.8
NPAS3-206ENST00000548645 PLXDC1Q8IUK5 500 aa20.02■□□□□ 0.8
NPAS3-206ENST00000548645 MAGT1Q9H0U3 335 aa20.02■□□□□ 0.8
NPAS3-206ENST00000548645 TMEM242Q9NWH2 141 aa20.02■□□□□ 0.8
NPAS3-206ENST00000548645 CST7O76096 145 aa20.02■□□□□ 0.79
NPAS3-206ENST00000548645 PPYP01298 95 aa20.02■□□□□ 0.79
NPAS3-206ENST00000548645 CD63P08962 238 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms