RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PITPNAQ00169 270 aa24.12■■□□□ 1.45
BRF1-213ENST00000548421 SCN1BQ07699 218 aa24.12■■□□□ 1.45
BRF1-213ENST00000548421 ZNF846Q147U1 533 aa24.12■■□□□ 1.45
BRF1-213ENST00000548421 NKAPLQ5M9Q1 402 aa24.12■■□□□ 1.45
BRF1-213ENST00000548421 Q6P435 159 aa24.12■■□□□ 1.45
BRF1-213ENST00000548421 C15orf40Q8WUR7 153 aa24.12■■□□□ 1.45
BRF1-213ENST00000548421 RCC2Q9P258 522 aaKnown RBP24.12■■□□□ 1.45
BRF1-213ENST00000548421 HSF4Q9ULV5 492 aa24.12■■□□□ 1.45
BRF1-213ENST00000548421 TRAV38-1A0A0B4J264 116 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 OR2H2O95918 312 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 HLA-DQB1P01920 261 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 ZNF44P15621 663 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 FUT3P21217 361 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 ARL6IP1Q15041 203 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 ZNF79Q15937 498 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 ATAD3CQ5T2N8 411 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 OR5T2Q8NGG2 359 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 ABHD1Q96SE0 405 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 PECRQ9BY49 303 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 CHODLQ9H9P2 273 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 SEBOXQ9HB31 216 aaPredicted RBP24.11■■□□□ 1.45
BRF1-213ENST00000548421 ZNF701Q9NV72 531 aaPredicted RBP24.11■■□□□ 1.45
BRF1-213ENST00000548421 PLEKHJ1Q9NW61 149 aa24.11■■□□□ 1.45
BRF1-213ENST00000548421 GNB3P16520 340 aa24.1■■□□□ 1.45
BRF1-213ENST00000548421 CEBPDP49716 269 aaPredicted RBP24.1■■□□□ 1.45
BRF1-213ENST00000548421 ZNF260Q3ZCT1 412 aa24.1■■□□□ 1.45
BRF1-213ENST00000548421 CDNFQ49AH0 187 aa24.1■■□□□ 1.45
BRF1-213ENST00000548421 STUMQ69YW2 141 aa24.1■■□□□ 1.45
BRF1-213ENST00000548421 PEG10Q86TG7 708 aaKnown RBP24.1■■□□□ 1.45
BRF1-213ENST00000548421 SNX29P2Q8IUI4 249 aa24.1■■□□□ 1.45
BRF1-213ENST00000548421 DEFB108BQ8NET1 73 aa24.1■■□□□ 1.45
BRF1-213ENST00000548421 AUNIPQ9H7T9 357 aa24.1■■□□□ 1.45
BRF1-213ENST00000548421 ZMAT3Q9HA38 289 aaKnown RBP24.1■■□□□ 1.45
BRF1-213ENST00000548421 IGKV1D-17A0A075B6S4 117 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 MFNGO00587 321 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 IGHV4-39P01824 125 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 GSTP1P09211 210 aaKnown RBP24.09■■□□□ 1.45
BRF1-213ENST00000548421 PRDX2P32119 198 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 BTG1P62324 171 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 C6orf201Q7Z4U5 140 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 RTN4RL2Q86UN3 420 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 ANGPTL6Q8NI99 470 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP24.09■■□□□ 1.45
BRF1-213ENST00000548421 ZNF222Q9UK12 451 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 EDARQ9UNE0 448 aa24.09■■□□□ 1.45
BRF1-213ENST00000548421 ABCA12Q86UK0 2595 aa24.08■■□□□ 1.45
BRF1-213ENST00000548421 SIRPB1O00241 398 aa24.08■■□□□ 1.45
BRF1-213ENST00000548421 FSTL3O95633 263 aa24.08■■□□□ 1.45
BRF1-213ENST00000548421 PYDC2Q56P42 97 aa24.08■■□□□ 1.45
BRF1-213ENST00000548421 CD177Q8N6Q3 437 aa24.08■■□□□ 1.45
BRF1-213ENST00000548421 SRRQ9GZT4 340 aa24.08■■□□□ 1.45
BRF1-213ENST00000548421 MYOZ1Q9NP98 299 aaPredicted RBP24.08■■□□□ 1.45
BRF1-213ENST00000548421 KCNK7Q9Y2U2 307 aa24.08■■□□□ 1.45
BRF1-213ENST00000548421 TRAV24A0A0B4J272 114 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 SLC33A1O00400 549 aaPredicted RBP24.07■■□□□ 1.44
BRF1-213ENST00000548421 PAX1P15863 534 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 LMO1P25800 156 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 ZMYND11Q15326 602 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 KCNJ8Q15842 424 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 SUMF2Q8NBJ7 301 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 ST8SIA4Q92187 359 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 BARX1Q9HBU1 254 aaPredicted RBP24.07■■□□□ 1.44
BRF1-213ENST00000548421 TMEM235A6NFC5 223 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 SERPINE3A8MV23 424 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 CTDSPLO15194 276 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 GYPAP02724 150 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 GABRA2P47869 451 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 TMEM33P57088 247 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 COL10A1Q03692 680 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 TIMD4Q96H15 378 aa24.07■■□□□ 1.44
BRF1-213ENST00000548421 APCP25054 2843 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 MCRIP1C9JLW8 97 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 TFF1P04155 84 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 GLAP06280 429 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 MELTFP08582 738 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 PTHLHP12272 177 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 CD40LGP29965 261 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 PPP5CP53041 499 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 ATP5J2P56134 94 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 MRPS10P82664 201 aaKnown RBP24.06■■□□□ 1.44
BRF1-213ENST00000548421 PNLIPRP3Q17RR3 467 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 HACD4Q5VWC8 232 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 BRICD5Q6PL45 260 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 GDPD1Q8N9F7 314 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 SULT4A1Q9BR01 284 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 FAAP24Q9BTP7 215 aa24.06■■□□□ 1.44
BRF1-213ENST00000548421 DPCDQ9BVM2 203 aaPredicted RBP24.06■■□□□ 1.44
BRF1-213ENST00000548421 HSPB6O14558 160 aa24.05■■□□□ 1.44
BRF1-213ENST00000548421 PPIHO43447 177 aaKnown RBP24.05■■□□□ 1.44
BRF1-213ENST00000548421 IGHV2-70P01814 119 aa24.05■■□□□ 1.44
BRF1-213ENST00000548421 MDH2P40926 338 aaKnown RBP24.05■■□□□ 1.44
BRF1-213ENST00000548421 RBM39Q14498 530 aaKnown RBP24.05■■□□□ 1.44
BRF1-213ENST00000548421 CARTPTQ16568 116 aa24.05■■□□□ 1.44
BRF1-213ENST00000548421 PAN3Q58A45 887 aaKnown RBP24.05■■□□□ 1.44
BRF1-213ENST00000548421 OLFML2AQ68BL7 652 aa24.05■■□□□ 1.44
BRF1-213ENST00000548421 RAB1CQ92928 201 aa24.05■■□□□ 1.44
BRF1-213ENST00000548421 GCDHQ92947 438 aaPredicted RBP24.05■■□□□ 1.44
BRF1-213ENST00000548421 CYYR1Q96J86 154 aa24.05■■□□□ 1.44
BRF1-213ENST00000548421 DNTTIP1Q9H147 329 aa24.05■■□□□ 1.44
BRF1-213ENST00000548421 TMEM165Q9HC07 324 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms