RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 TRBV2A0A0J9YWF9 115 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 EFCAB10A6NFE3 127 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 F8VVB4 439 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 F8VWA3 439 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 NXPH2O95156 264 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 ZNF20P17024 532 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 AZGP1P25311 298 aaKnown RBP11.33□□□□□ -0.6
PTCH1-217ENST00000548420 GABRA2P47869 451 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 ATP1B3P54709 279 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 ST3GAL4Q11206 333 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 OR2G6Q5TZ20 316 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 XAF1Q6GPH4 301 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 ZNF529Q6P280 563 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 TMPRSS11AQ6ZMR5 421 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 ZNF561Q8N587 486 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 OR4F17Q8NGA8 305 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 OR13C3Q8NGS6 347 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 OR52N1Q8NH53 320 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 RGP1Q92546 391 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-217ENST00000548420 CEP19Q96LK0 163 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 OR4F4Q96R69 305 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 PCGF1Q9BSM1 259 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 VCXQ9H320 206 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 ZCCHC4Q9H5U6 513 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 FKBP14Q9NWM8 211 aa11.33□□□□□ -0.6
PTCH1-217ENST00000548420 RNASEK-C17orf49H0YIS7 233 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 LALBAP00709 142 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 MTCP1P56278 107 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 CDK5R1Q15078 307 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 METTL11BQ5VVY1 283 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 METAP1DQ6UB28 335 aaPredicted RBP11.32□□□□□ -0.6
PTCH1-217ENST00000548420 LHFPL2Q6ZUX7 228 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 SLC25A26Q70HW3 274 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 SERPINA12Q8IW75 414 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 MKXQ8IYA7 352 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 Q8N7P7 452 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 OR5D14Q8NGL3 314 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 COMMD4Q9H0A8 199 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 PALMDQ9NP74 551 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 VPREB3Q9UKI3 123 aa11.32□□□□□ -0.6
PTCH1-217ENST00000548420 TRBV23-1A0A0A0MS06 115 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 ERICH4A6NGS2 130 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 MYL12AP19105 171 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 PDZK1IP1Q13113 114 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 DMKNQ6E0U4 476 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-217ENST00000548420 Q8IYB0 196 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 GATAD2BQ8WXI9 593 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 SLAMF9Q96A28 289 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 OPALINQ96PE5 141 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 CITED2Q99967 270 aaPredicted RBP11.31□□□□□ -0.6
PTCH1-217ENST00000548420 FAM234AQ9H0X4 552 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 PPA2Q9H2U2 334 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 DPAGT1Q9H3H5 408 aa11.31□□□□□ -0.6
PTCH1-217ENST00000548420 HECTD4Q9Y4D8 3996 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 ABCA13Q86UQ4 5058 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 IGHV1-69DA0A0B4J2H0 117 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 IGKV1-12A0A0C4DH73 117 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 MEGF11A6BM72 1044 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 K7N7A8 449 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 M0R1W7 72 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 SLC1A7O00341 560 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 ZNF737O75373 536 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 IGKV1D-12P01611 117 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 IGHV1-69P01742 117 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 TK1P04183 234 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 VSIG10L2P0DP72 767 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 NDUFB7P17568 137 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 C21orf33P30042 268 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-217ENST00000548420 NPBWR2P48146 333 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 CEBPDP49716 269 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-217ENST00000548420 AQP4P55087 323 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 MED21Q13503 144 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 ZNF146Q15072 292 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 C6orf141Q5SZD1 244 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 RNLSQ5VYX0 342 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 NDUFA11Q86Y39 141 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 SAXO1Q8IYX7 474 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 TMEM185AQ8NFB2 350 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 BPIFB6Q8NFQ5 453 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 OR13C9Q8NGT0 318 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 GPR148Q8TDV2 347 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 H1FXQ92522 213 aaKnown RBP11.3□□□□□ -0.6
PTCH1-217ENST00000548420 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 RHOFQ9HBH0 211 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 CHCHD3Q9NX63 227 aaKnown RBP11.3□□□□□ -0.6
PTCH1-217ENST00000548420 DHDHQ9UQ10 334 aa11.3□□□□□ -0.6
PTCH1-217ENST00000548420 SULT1B1O43704 296 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 FBXO24O75426 580 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 KDM4BO94953 1096 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 CHRM2P08172 466 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 SNRPBP14678 240 aaKnown RBP11.29□□□□□ -0.6
PTCH1-217ENST00000548420 KIR2DS4P43632 304 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 ZP1P60852 638 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 RPS11P62280 158 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTCH1-217ENST00000548420 VMO1Q7Z5L0 202 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 CMTM4Q8IZR5 234 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 FAM58AQ8N1B3 248 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 BATF2Q8N1L9 274 aa11.29□□□□□ -0.6
PTCH1-217ENST00000548420 C11orf42Q8N5U0 333 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms