RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 PHLDA2Q53GA4 152 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 HES3Q5TGS1 186 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 SAXO1Q8IYX7 474 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 LRTM2Q8N967 370 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 SLAMF9Q96A28 289 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 POM121L2Q96KW2 1035 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 FER1L6-AS2Q96M78 137 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 SUCNR1Q9BXA5 334 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 ZC4H2Q9NQZ6 224 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 PCNX2A6NKB5 2137 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 KLRC4-KLRK1H3BQV0 150 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 K7EPK0 472 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 RPL12P30050 165 aaKnown RBP13.35□□□□□ -0.27
BRF1-212ENST00000547562 EIF5AP63241 154 aaKnown RBP13.35□□□□□ -0.27
BRF1-212ENST00000547562 OR2A2Q6IF42 318 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 NUFIP2Q7Z417 695 aaKnown RBP13.35□□□□□ -0.27
BRF1-212ENST00000547562 FAM71E2Q8N5Q1 922 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 ARL11Q969Q4 196 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 LRRC46Q96FV0 321 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 PRRX2Q99811 253 aa13.35□□□□□ -0.27
BRF1-212ENST00000547562 NGFP01138 241 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 FGF12P61328 243 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 ZNF273Q14593 569 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 RPL7L1Q6DKI1 246 aaKnown RBP13.34□□□□□ -0.27
BRF1-212ENST00000547562 LIAT1Q6ZQX7 453 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 MCEMP1Q8IX19 187 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 LHFPL5Q8TAF8 219 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 EXTL1Q92935 676 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 SYT3Q9BQG1 590 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 LPAR3Q9UBY5 353 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 ZNF629Q9UEG4 869 aaPredicted RBP13.34□□□□□ -0.27
BRF1-212ENST00000547562 LSM5Q9Y4Y9 91 aaKnown RBP13.34□□□□□ -0.27
BRF1-212ENST00000547562 ACTL6AO96019 429 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 AADACP22760 399 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 HERV-K104P61576 105 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 DEFA5Q01523 94 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 OR5L1Q8NGL2 311 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 RSRP1Q9BUV0 290 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 TAF9BQ9HBM6 251 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 LIPGQ9Y5X9 500 aa13.34□□□□□ -0.27
BRF1-212ENST00000547562 ZNF705EA8MWA4 302 aaPredicted RBP13.33□□□□□ -0.27
BRF1-212ENST00000547562 NUDT19A8MXV4 375 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 ZNF732B4DXR9 585 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 PLP2Q04941 152 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 SLC10A1Q14973 349 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 Q6ZS49 121 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 LYZL2Q7Z4W2 148 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 ZFP62Q8NB50 900 aaPredicted RBP13.33□□□□□ -0.27
BRF1-212ENST00000547562 OR11L1Q8NGX0 322 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 GLYATL2Q8WU03 294 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 MSI2Q96DH6 328 aaKnown RBP13.33□□□□□ -0.27
BRF1-212ENST00000547562 C18orf12Q96KH6 178 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 PLSCR2Q9NRY7 297 aa13.33□□□□□ -0.27
BRF1-212ENST00000547562 TMEM218A2RU14 115 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 PRSS44E7EML9 344 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 H7C1Q1 480 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 LRP3O75074 770 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 SCGB1D2O95969 90 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 PPYP01298 95 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 IGSF11Q5DX21 431 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 EIF5AL1Q6IS14 154 aaKnown RBP13.33□□□□□ -0.28
BRF1-212ENST00000547562 IL22RA1Q8N6P7 574 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 CCDC71LQ8N9Z2 235 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 OR5T2Q8NGG2 359 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 HS3ST6Q96QI5 342 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 OPA3Q9H6K4 179 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 MMP26Q9NRE1 261 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 MTCH1Q9NZJ7 389 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 R4GN57 208 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 ESPL1Q14674 2120 aa13.33□□□□□ -0.28
BRF1-212ENST00000547562 MBPP02686 304 aaPredicted RBP13.32□□□□□ -0.28
BRF1-212ENST00000547562 RCC1P18754 421 aaPredicted RBP13.32□□□□□ -0.28
BRF1-212ENST00000547562 ARHGDIBP52566 201 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 AKR1C2P52895 323 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 AKR1C1Q04828 323 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 MST1LQ2TV78 715 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.32□□□□□ -0.28
BRF1-212ENST00000547562 LGI3Q8N145 548 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 OR5A2Q8NGI9 324 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 SAT2Q96F10 170 aaPredicted RBP13.32□□□□□ -0.28
BRF1-212ENST00000547562 ZNF552Q9H707 407 aaPredicted RBP13.32□□□□□ -0.28
BRF1-212ENST00000547562 FAM86C1Q9NVL1 165 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 RCC2Q9P258 522 aaKnown RBP13.32□□□□□ -0.28
BRF1-212ENST00000547562 FBXL17Q9UF56 701 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 PRSS50Q9UI38 385 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 AMDHD2Q9Y303 409 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 CD300LBA8K4G0 201 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 NUPL2O15504 423 aaKnown RBP13.32□□□□□ -0.28
BRF1-212ENST00000547562 NAPSAO96009 420 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 GAPDHP04406 335 aaKnown RBP13.32□□□□□ -0.28
BRF1-212ENST00000547562 GLI4P10075 376 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 CD46P15529 392 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 ATF4P18848 351 aaPredicted RBP13.32□□□□□ -0.28
BRF1-212ENST00000547562 TMEM33P57088 247 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 SRSF7Q16629 238 aaKnown RBP eCLIP13.32□□□□□ -0.28
BRF1-212ENST00000547562 MKXQ8IYA7 352 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 SMIM8Q96KF7 97 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 PLEKHA2Q9HB19 425 aa13.32□□□□□ -0.28
BRF1-212ENST00000547562 TRAPPC2LH3BP13 241 aa13.31□□□□□ -0.28
BRF1-212ENST00000547562 ABCD4O14678 606 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms