RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 GDPD3Q7L5L3 318 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 GPR141Q7Z602 305 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 MRI1Q9BV20 369 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 FUNDC2Q9BWH2 189 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 MMP26Q9NRE1 261 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 TMEM160Q9NX00 188 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 IL36RNQ9UBH0 155 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 STEAP1Q9UHE8 339 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 INSIG2Q9Y5U4 225 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 MALRD1Q5VYJ5 2156 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 CELSR1Q9NYQ6 3014 aa11.42□□□□□ -0.58
PTCH1-213ENST00000546820 TRBV23-1A0A0A0MS06 115 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 A0A1B0GW55 424 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 A0A1W2PPH5 198 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 SIRPB1O00241 398 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 TFAP2AP05549 437 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 DUX4L2P0CJ85 424 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 DUX4L3P0CJ86 424 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 DUX4L4P0CJ87 422 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 DUX4L5P0CJ88 424 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 DUX4L6P0CJ89 424 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 DUX4L7P0CJ90 424 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 PPIAL4GP0DN37 164 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 SELLP14151 372 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 MGMTP16455 207 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 SDC2P34741 201 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 RPL5P46777 297 aaKnown RBP11.41□□□□□ -0.58
PTCH1-213ENST00000546820 RBM11P57052 281 aaKnown RBP11.41□□□□□ -0.58
PTCH1-213ENST00000546820 GRK1Q15835 563 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 MPV17LQ2QL34 196 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 PIGYQ3MUY2 71 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 DUX4L9Q6RFH8 374 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-213ENST00000546820 Q71RC1 249 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-213ENST00000546820 OR8H2Q8N162 312 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 GFI1Q99684 422 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 DCTN5Q9BTE1 182 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 CENPOQ9BU64 300 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 SELENOIQ9C0D9 397 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 C7orf69Q9H7B7 122 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 SPACA1Q9HBV2 294 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 DUX4Q9UBX2 424 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 METRNQ9UJH8 293 aa11.41□□□□□ -0.58
PTCH1-213ENST00000546820 RPUSD1Q9UJJ7 312 aaKnown RBP11.41□□□□□ -0.58
PTCH1-213ENST00000546820 CSPG4Q6UVK1 2322 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 A0A0G2JK05 382 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 A0A1W2PQ09 198 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A10PA6NDY2 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A18PA6NE21 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A16PA6NEW6 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A20PA6NIJ5 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A8PA6NJQ4 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A7PA6NKC0 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 IFITM5A6NNB3 132 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 NOTOA8MTQ0 251 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A22PA8MWA6 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A12PA8MX19 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A5PA8MXJ8 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A23PA8MXZ1 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 MGST3O14880 152 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 ZNF737O75373 536 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 OR7C1O76099 320 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-213ENST00000546820 MPIG6BO95866 241 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A15PP0C7V4 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A13PP0C7W8 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A14PP0C7W9 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM90A24PP0C7X0 464 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 ALDH3B2P48448 385 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 LSM3P62310 102 aaKnown RBP11.4□□□□□ -0.58
PTCH1-213ENST00000546820 PAX2Q02962 417 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 PDCD1Q15116 288 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM189A2Q15884 450 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 CR1LQ2VPA4 569 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 C2orf76Q3KRA6 126 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 HES5Q5TA89 166 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 Q6P435 159 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 C17orf107Q6ZR85 190 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 OR2W3Q7Z3T1 314 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 ANKRD13BQ86YJ7 626 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 CMTM4Q8IZR5 234 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 SLC25A28Q96A46 364 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 FAM3DQ96BQ1 224 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 URM1Q9BTM9 101 aaKnown RBP11.4□□□□□ -0.58
PTCH1-213ENST00000546820 BARHL1Q9BZE3 327 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 SHARPINQ9H0F6 387 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 BANF2Q9H503 90 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 IFT22Q9H7X7 185 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 LPAR3Q9UBY5 353 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 AUP1Q9Y679 476 aa11.4□□□□□ -0.58
PTCH1-213ENST00000546820 A0A1W2PP11 408 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 SHISA3A0PJX4 238 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 TMEM82A0PJX8 343 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 C22orf46C9J442 243 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 AIPO00170 330 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 SLC33A1O00400 549 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-213ENST00000546820 GEMIN2O14893 280 aaKnown RBP11.39□□□□□ -0.59
PTCH1-213ENST00000546820 TMEM127O75204 238 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 VSIG8P0DPA2 414 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 CFPP27918 469 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 EDDM3BP56851 147 aa11.39□□□□□ -0.59
PTCH1-213ENST00000546820 OR10A3P58181 314 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms