RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 C1orf159Q96HA4 380 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 Q96M66 194 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 OR5V1Q9UGF6 321 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 PCDHB10Q9UN67 800 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 SONP18583 2426 aaKnown RBP13.52□□□□□ -0.25
LIMS2-217ENST00000545738 TRAV24A0A0B4J272 114 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 DPPA5A6NC42 116 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 SIRPB1O00241 398 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 BPNT1O95861 308 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 MPIG6BO95866 241 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 TMBIM6P55061 237 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 NHLRC3Q5JS37 347 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 SPIN3Q5JUX0 258 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 WDR25Q64LD2 544 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-217ENST00000545738 OR5H6Q8NGV6 325 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 RAB2BQ8WUD1 216 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 SLC25A46Q96AG3 418 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 MSI2Q96DH6 328 aaKnown RBP13.51□□□□□ -0.25
LIMS2-217ENST00000545738 NEIL1Q96FI4 390 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-217ENST00000545738 S100A13Q99584 98 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 SELENOIQ9C0D9 397 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 CHST6Q9GZX3 395 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 DCSTAMPQ9H295 470 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 RHOFQ9HBH0 211 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 MIOXQ9UGB7 285 aa13.51□□□□□ -0.25
LIMS2-217ENST00000545738 C22orf46C9J442 243 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 SLC33A1O00400 549 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-217ENST00000545738 ZNF780AO75290 641 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-217ENST00000545738 CSTBP04080 98 aaKnown RBP13.5□□□□□ -0.25
LIMS2-217ENST00000545738 GTF2F2P13984 249 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 PITPNBP48739 271 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 PSMD7P51665 324 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 LCN2P80188 198 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 BRICD5Q6PL45 260 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 DACT3Q96B18 629 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-217ENST00000545738 DNTTIP1Q9H147 329 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 LPAR5Q9H1C0 372 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 MTORP42345 2549 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 HSPB6O14558 160 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 NDUFA2O43678 99 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 IL13RA1P78552 427 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 PAX2Q02962 417 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 SCN1BQ07699 218 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 KCNJ8Q15842 424 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 IDNKQ5T6J7 187 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 OR4S1Q8NGB4 309 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 OR8B3Q8NGG8 313 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 LGALS14Q8TCE9 139 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 C18orf12Q96KH6 178 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 OR8B2Q96RD0 313 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 SSBP3Q9BWW4 388 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-217ENST00000545738 MMP26Q9NRE1 261 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 GHRLQ9UBU3 117 aa13.5□□□□□ -0.25
LIMS2-217ENST00000545738 UBBP0CG47 229 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 GABRR1P24046 479 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 LMO1P25800 156 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 OR3A1P47881 315 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 RPS27AP62979 156 aaKnown RBP13.49□□□□□ -0.25
LIMS2-217ENST00000545738 IL13RA2Q14627 380 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 SLC36A1Q7Z2H8 476 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 ASCC1Q8N9N2 400 aaKnown RBP13.49□□□□□ -0.25
LIMS2-217ENST00000545738 TMEM185AQ8NFB2 350 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 RAB39BQ96DA2 213 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 TMEM59Q9BXS4 323 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 FBLN5Q9UBX5 448 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 KIAA2026Q5HYC2 2103 aa13.49□□□□□ -0.25
LIMS2-217ENST00000545738 MEX3AA1L020 520 aaKnown RBP13.48□□□□□ -0.25
LIMS2-217ENST00000545738 NKX6-3A6NJ46 265 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 FOXI3A8MTJ6 420 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-217ENST00000545738 A8MXK9 166 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 K7N7A8 449 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 OR7C1O76099 320 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-217ENST00000545738 TK1P04183 234 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 ZNF44P15621 663 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 ZNF16P17020 682 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-217ENST00000545738 GPR176Q14439 515 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 MOGAT2Q3SYC2 334 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 USP43Q70EL4 1123 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 BPIFB2Q8N4F0 458 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 ZNF561Q8N587 486 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 TPRX1Q8N7U7 411 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 KCNG3Q8TAE7 436 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 ST8SIA4Q92187 359 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 SLC25A38Q96DW6 304 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 TM2D1Q9BX74 207 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 CST11Q9H112 138 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 PPA2Q9H2U2 334 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 SEBOXQ9HB31 216 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-217ENST00000545738 SLC25A10Q9UBX3 287 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-217ENST00000545738 CLN8Q9UBY8 286 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 MXRA5Q9NR99 2828 aa13.48□□□□□ -0.25
LIMS2-217ENST00000545738 NSD1Q96L73 2696 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-217ENST00000545738 SH2D1BO14796 132 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 CHRM2P08172 466 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 INHBBP09529 407 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 BMXP51813 675 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 CAPZA1P52907 286 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 GNB2P62879 340 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 ESCO2Q56NI9 601 aa13.47□□□□□ -0.25
LIMS2-217ENST00000545738 NLRC3Q7RTR2 1065 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms