RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 SLC26A1Q9H2B4 701 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 MIA3Q5JRA6 1907 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 TRGV8A0A0C4DH27 118 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 MYPOPQ86VE0 399 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM52Q8NDY8 209 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 OR5M9Q8NGP3 310 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 KCNK15Q9H427 330 aa11.03□□□□□ -0.64
COL4A6-209ENST00000545689 ELOA3CA0A087WX78 387 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-209ENST00000545689 IGKV1-8A0A0C4DH67 115 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 IGHV5-10-1A0A0J9YXX1 117 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 NTF3P20783 257 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 LGALSLQ3ZCW2 172 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-209ENST00000545689 TMEM108Q6UXF1 575 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 NHLRC2Q8NBF2 726 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 OR5A2Q8NGI9 324 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 ACY3Q96HD9 319 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 PARP11Q9NR21 331 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 NAT8Q9UHE5 227 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 DBX1A6NMT0 343 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 J3QT63 122 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 OPN1MWP04001 364 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 IGHV4-34P06331 123 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 OPN1MW2P0DN77 364 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 OPN1MW3P0DN78 364 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 NQO2P16083 231 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 HLA-GP17693 338 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 F2RP25116 425 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 IQCJQ1A5X6 159 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 GAB4Q2WGN9 574 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 COX19Q49B96 90 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 OR10G4Q8NGN3 311 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 OR10G9Q8NGN4 311 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 OR10G7Q8NGN6 311 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 WDR13Q9H1Z4 485 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 CLCF1Q9UBD9 225 aa11.02□□□□□ -0.64
COL4A6-209ENST00000545689 A0A1W2PN81 502 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 H0Y8G0 127 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 SYNGR2O43760 224 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 RPS4Y1P22090 263 aaKnown RBP11.02□□□□□ -0.65
COL4A6-209ENST00000545689 CHRNA7P36544 502 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 CD300CQ08708 224 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 C4orf17Q53FE4 359 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 STUMQ69YW2 141 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 WDR73Q6P4I2 378 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 OR2T6Q8NHC8 308 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 FAM103A1Q9BTL3 118 aaKnown RBP11.02□□□□□ -0.65
COL4A6-209ENST00000545689 A0A0U1RQV5 110 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 SEC14L6B5MCN3 397 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 RPL36A-HNRNPH2H7BZ11 118 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 YIF1AO95070 293 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 PDCD1Q15116 288 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 OR4A4PQ8NGN8 299 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 VSTM2AQ8TAG5 236 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 ANAPC16Q96DE5 110 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 SH2D2AQ9NP31 389 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 GPR27Q9NS67 375 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 COL11A1P12107 1806 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-209ENST00000545689 ADAP1O75689 374 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 IGKV1D-16P01601 117 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 HPXP02790 462 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 MPGP29372 298 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 KIR3DL2P43630 455 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 RPL11P62913 178 aaKnown RBP11.02□□□□□ -0.65
COL4A6-209ENST00000545689 TNFAIP6P98066 277 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-209ENST00000545689 ETV3LQ6ZN32 361 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 AAMDCQ9H7C9 122 aa11.02□□□□□ -0.65
COL4A6-209ENST00000545689 MYO16Q9Y6X6 1858 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 HYAL3O43820 417 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-209ENST00000545689 PPYP01298 95 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 BMI1P35226 326 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 ZNF83P51522 516 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 MLF1P58340 268 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 FAM3AP98173 230 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 TMEM65Q6PI78 240 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 NTMQ9P121 344 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 A0A1B0GU03 582 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 PRRX1P54821 245 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 NAAAQ02083 359 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 FAM74A3Q4VXF1 159 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 VAX1Q5SQQ9 334 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 MOB3BQ86TA1 216 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 TNS1Q9HBL0 1735 aaKnown RBP11.01□□□□□ -0.65
COL4A6-209ENST00000545689 DYNLT3P51808 116 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 UBAC2Q8NBM4 344 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 ZNRF4Q8WWF5 429 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 BARX1Q9HBU1 254 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-209ENST00000545689 TMEM167BQ9NRX6 74 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 ELF5Q9UKW6 265 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-209ENST00000545689 SERTM2A0A1B0GWG4 89 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 A0A1W2PPC1 479 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 GCM2O75603 506 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-209ENST00000545689 OR3A1P47881 315 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 ROM1Q03395 351 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 ALKBH6Q3KRA9 238 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 SSX8Q7RTT4 187 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 CXorf67Q86X51 503 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-209ENST00000545689 FAM219AQ8IW50 185 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 LYG1Q8N1E2 194 aa11.01□□□□□ -0.65
COL4A6-209ENST00000545689 Q9N2K0 584 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms