RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 SEBOXQ9HB31 216 aaPredicted RBP10.85□□□□□ -0.67
CDCA3-210ENST00000545368 SPACA1Q9HBV2 294 aa10.85□□□□□ -0.67
CDCA3-210ENST00000545368 SPATA2Q9UM82 520 aa10.85□□□□□ -0.67
CDCA3-210ENST00000545368 CSMD2Q7Z408 3487 aa10.85□□□□□ -0.67
CDCA3-210ENST00000545368 METTL21EPA6NDL7 271 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 A6NHS1 94 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 RNF223E7ERA6 249 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 SIRPB1O00241 398 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 GEMIN2O14893 280 aaKnown RBP10.84□□□□□ -0.67
CDCA3-210ENST00000545368 LDLRAD4O15165 306 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 NDUFB3O43676 98 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 OR2H2O95918 312 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 TFF1P04155 84 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 PITPNBP48739 271 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 NPY4RP50391 375 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 COL10A1Q03692 680 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 LOXL1Q08397 574 aaPredicted RBP10.84□□□□□ -0.67
CDCA3-210ENST00000545368 TAF9Q16594 264 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 ESCO2Q56NI9 601 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 LRRC10Q5BKY1 277 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 LYPD2Q6UXB3 125 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 FAM216BQ8N7L0 139 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 TMEM185AQ8NFB2 350 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 OR56B1Q8NGI3 324 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 DCUN1D5Q9BTE7 237 aa10.84□□□□□ -0.67
CDCA3-210ENST00000545368 F5H0A9 414 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-210ENST00000545368 TNFRSF13BO14836 293 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-210ENST00000545368 SCGNO76038 276 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 WNT2P09544 360 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 AMY2BP19961 511 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 GNB2P62879 340 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 PDCD1Q15116 288 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 PAN3Q58A45 887 aaKnown RBP10.83□□□□□ -0.68
CDCA3-210ENST00000545368 ATAD3CQ5T2N8 411 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 FOXB2Q5VYV0 432 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 Q6P435 159 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 ZNRF1Q8ND25 227 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 PHF21AQ96BD5 680 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 SNX22Q96L94 193 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 NEDD4LQ96PU5 975 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 NICN1Q9BSH3 213 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 SSBP3Q9BWW4 388 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-210ENST00000545368 FAM234AQ9H0X4 552 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 LPAR5Q9H1C0 372 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 ATG5Q9H1Y0 275 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 IFT22Q9H7X7 185 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 RHBDL2Q9NX52 303 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 COMMD3Q9UBI1 195 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 CTSZQ9UBR2 303 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 SLC25A10Q9UBX3 287 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-210ENST00000545368 CLN8Q9UBY8 286 aa10.83□□□□□ -0.68
CDCA3-210ENST00000545368 SETXQ7Z333 2677 aaKnown RBP10.82□□□□□ -0.68
CDCA3-210ENST00000545368 A0A096LNT2 108 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 A0A1B0GW55 424 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 SLC33A1O00400 549 aaPredicted RBP10.82□□□□□ -0.68
CDCA3-210ENST00000545368 DVL1O14640 695 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 PDCD6O75340 191 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 TK1P04183 234 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 DUX4L2P0CJ85 424 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 DUX4L3P0CJ86 424 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 DUX4L4P0CJ87 422 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 DUX4L5P0CJ88 424 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 DUX4L6P0CJ89 424 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 DUX4L7P0CJ90 424 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 NDUFB7P17568 137 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 LMO1P25800 156 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 VEGFCP49767 419 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 EFNB2P52799 333 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 LMO4P61968 165 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 PLA2G7Q13093 441 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 UBE2NLQ5JXB2 153 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 NKAPLQ5M9Q1 402 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 DUX4L9Q6RFH8 374 aaPredicted RBP10.82□□□□□ -0.68
CDCA3-210ENST00000545368 OR8H2Q8N162 312 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 SAMD12Q8N8I0 201 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 OR5D13Q8NGL4 314 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 OR5H6Q8NGV6 325 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 NEK7Q8TDX7 302 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 ST8SIA4Q92187 359 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 DUX4Q9UBX2 424 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 MAB21L2Q9Y586 359 aa10.82□□□□□ -0.68
CDCA3-210ENST00000545368 MCRIP1C9JLW8 97 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 H7C1Q1 480 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 K7N7A8 449 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 HSPB6O14558 160 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 GPR37O15354 613 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 PSPNO60542 156 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 ZNF737O75373 536 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 FOXH1O75593 365 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 SELLP14151 372 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 FUT3P21217 361 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 BLVRBP30043 206 aaPredicted RBP10.81□□□□□ -0.68
CDCA3-210ENST00000545368 KCNJ3P48549 501 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 RBM39Q14498 530 aaKnown RBP10.81□□□□□ -0.68
CDCA3-210ENST00000545368 GRK1Q15835 563 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 WDR25Q64LD2 544 aaPredicted RBP10.81□□□□□ -0.68
CDCA3-210ENST00000545368 RAB12Q6IQ22 244 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 GDPD3Q7L5L3 318 aa10.81□□□□□ -0.68
CDCA3-210ENST00000545368 SUMF2Q8NBJ7 301 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms