RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 C17orf107Q6ZR85 190 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 RNF144BQ7Z419 303 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 NANOGP1Q8N7R0 232 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 C3orf56Q8N813 242 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 PXT1Q8NFP0 134 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 OR52N4Q8NGI2 321 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 OR51A2Q8NGJ7 313 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 TNFAIP8L1Q8WVP5 186 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 FAM192AQ9GZU8 254 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 DPAGT1Q9H3H5 408 aa12.87□□□□□ -0.35
CCDC78-216ENST00000544996 DNHD1Q96M86 4753 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 BTBD17A6NE02 478 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 SIRPB1O00241 398 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 MGST3O14880 152 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 OR2H2O95918 312 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 CRYBA1P05813 215 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 CDK1P06493 297 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 ZNF728P0DKX0 622 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 ZNF44P15621 663 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 CCL3L1P16619 93 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 CELP19835 753 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 BDKRB2P30411 391 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 SAA4P35542 130 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 HSPA13P48723 471 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 MTNR1BP49286 362 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 SCN1BQ07699 218 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 RIPK1Q13546 671 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 ZNF273Q14593 569 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 RSU1Q15404 277 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 CRIP3Q6Q6R5 217 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 LDLRAD3Q86YD5 345 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 CHST4Q8NCG5 386 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 MND1Q9BWT6 205 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 CHST6Q9GZX3 395 aa12.86□□□□□ -0.35
CCDC78-216ENST00000544996 TRBV5-5A0A0J9YX44 114 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 PNMA8CA0A1B0GUJ8 204 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 FUOMA2VDF0 154 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 GABRPO00591 440 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 DEGS1O15121 323 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 PSPNO60542 156 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 RBP4P02753 201 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 MYF6P23409 242 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 LMO1P25800 156 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 ZNF93P35789 620 aaPredicted RBP12.85□□□□□ -0.35
CCDC78-216ENST00000544996 MIDNQ504T8 468 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 AWAT1Q58HT5 328 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 DDI2Q5TDH0 399 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 RNLSQ5VYX0 342 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 ELP2Q6IA86 826 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 ASPHD2Q6ICH7 369 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 PNKDQ8N490 385 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 C11orf42Q8N5U0 333 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 OR4S1Q8NGB4 309 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 OR13C5Q8NGS8 318 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 THRSPQ92748 146 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 PGLYRP3Q96LB9 341 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 ZNF714Q96N38 554 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 S100A13Q99584 98 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 CHIAQ9BZP6 476 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 TPRKBQ9Y3C4 175 aa12.85□□□□□ -0.35
CCDC78-216ENST00000544996 C17orf98A8MV24 154 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 CD1AP06126 327 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 ERP29P30040 261 aaKnown RBP12.84□□□□□ -0.35
CCDC78-216ENST00000544996 PTGFRP43088 359 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 IER3P46695 156 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 OR3A1P47881 315 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 LGALS4P56470 323 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 RPS11P62280 158 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC78-216ENST00000544996 BDH1Q02338 343 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 HCP5Q6MZN7 132 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 IZUMO2Q6UXV1 221 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 TRAPPC6BQ86SZ2 158 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 OR13D1Q8NGV5 346 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 DYRK2Q92630 601 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 CDCA4Q9BXL8 241 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 ANKRD60Q9BZ19 345 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 PAK1IP1Q9NWT1 392 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-216ENST00000544996 LINC00312Q9Y6C7 94 aa12.84□□□□□ -0.35
CCDC78-216ENST00000544996 A0A0G2JK05 382 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 MEX3AA1L020 520 aaKnown RBP12.83□□□□□ -0.36
CCDC78-216ENST00000544996 FAM181BA6NEQ2 426 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 GPX5O75715 221 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 COX7A1P24310 79 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 MAPK3P27361 379 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-216ENST00000544996 CFPP27918 469 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 TGFBR2P37173 567 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 DLX6P56179 175 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 P2RX3P56373 397 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 RPL15P61313 204 aaKnown RBP12.83□□□□□ -0.36
CCDC78-216ENST00000544996 ZNF782Q6ZMW2 699 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-216ENST00000544996 TPRX1Q8N7U7 411 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 ORAI1Q96D31 301 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 NR1H4Q96RI1 486 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-216ENST00000544996 METTL9Q9H1A3 318 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 PCDHB16Q9NRJ7 776 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 ZNRD1Q9P1U0 126 aa12.83□□□□□ -0.36
CCDC78-216ENST00000544996 ING4Q9UNL4 249 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms