RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 OSGIN2Q9Y236 505 aa12.28□□□□□ -0.44
VPS33A-209ENST00000544349 LOC105371267A0A1B0GV96 52 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 C5orf51A6NDU8 294 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 CD300LBA8K4G0 201 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 C1QTNF9BB2RNN3 333 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 AGFG2O95081 481 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 C1QTNF9P0C862 333 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 GABRR1P24046 479 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 FPR2P25090 351 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 PRDX4Q13162 271 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 ANKRD55Q3KP44 614 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 PRR30Q53SZ7 412 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-209ENST00000544349 TMEM128Q5BJH2 165 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 ZNF474Q6S9Z5 364 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-209ENST00000544349 ACOT7LQ6ZUV0 252 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 C6orf201Q7Z4U5 140 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 STPG2Q8N412 459 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 TM2D1Q9BX74 207 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 OBP2BQ9NPH6 170 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 EHFQ9NZC4 300 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 ARID1AO14497 2285 aa12.27□□□□□ -0.45
VPS33A-209ENST00000544349 H0YIZ8 118 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 SPRY1O43609 319 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-209ENST00000544349 ANGPTL7O43827 346 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 SMPD2O60906 423 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 SFT2D2O95562 160 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 PLATP00750 562 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 ASCL4Q6XD76 172 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 HSD17B13Q7Z5P4 300 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-209ENST00000544349 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
VPS33A-209ENST00000544349 METTL9Q9H1A3 318 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 CHMP1AQ9HD42 196 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-209ENST00000544349 ZNF835Q9Y2P0 537 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 OR5H1A6NKK0 313 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 RPS2P15880 293 aaKnown RBP12.26□□□□□ -0.45
VPS33A-209ENST00000544349 IL32P24001 234 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 NKAPLQ5M9Q1 402 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 TMEM185AQ8NFB2 350 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 PXT1Q8NFP0 134 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 THAP6Q8TBB0 222 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 MRPS24Q96EL2 167 aaKnown RBP12.26□□□□□ -0.45
VPS33A-209ENST00000544349 SLC25A32Q9H2D1 315 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 ZNF701Q9NV72 531 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-209ENST00000544349 SPEF1Q9Y4P9 236 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 SESN1Q9Y6P5 492 aa12.26□□□□□ -0.45
VPS33A-209ENST00000544349 CEP295Q9C0D2 2601 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 ZGRF1Q86YA3 2104 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 PGAM2P15259 253 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 CBX5P45973 191 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 PPP1CBP62140 327 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 PDZK1IP1Q13113 114 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 SPATA46Q5T0L3 261 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 UNQ6126/PRO20091Q6UXV3 157 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 FBXW12Q6X9E4 464 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 ZDHHC23Q8IYP9 409 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 ZSCAN4Q8NAM6 433 aaPredicted RBP12.25□□□□□ -0.45
VPS33A-209ENST00000544349 Q96M66 194 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 ZNF629Q9UEG4 869 aaPredicted RBP12.25□□□□□ -0.45
VPS33A-209ENST00000544349 AMDHD2Q9Y303 409 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 PQLC2LA1A4F0 135 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 GLRA1P23415 457 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 CPT2P23786 658 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 PSMB6P28072 239 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 UCP2P55851 309 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 RSU1Q15404 277 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 CEACAM21Q3KPI0 293 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 HPSE2Q8WWQ2 592 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 DCUN1D4Q92564 292 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 RNF126Q9BV68 326 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 FGF23Q9GZV9 251 aaPredicted RBP12.25□□□□□ -0.45
VPS33A-209ENST00000544349 PPA2Q9H2U2 334 aa12.25□□□□□ -0.45
VPS33A-209ENST00000544349 PRRC2CQ9Y520 2896 aaKnown RBP12.25□□□□□ -0.45
VPS33A-209ENST00000544349 IGKV1-12A0A0C4DH73 117 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 MSGN1A6NI15 193 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 IGKV1D-12P01611 117 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 IGLV1-44P01699 117 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 CSTBP04080 98 aaKnown RBP12.24□□□□□ -0.45
VPS33A-209ENST00000544349 OR2T2Q6IF00 324 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 CALHM1Q8IU99 346 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 BOD1L1Q8NFC6 3051 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 DYRK2Q92630 601 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 OR10C1Q96KK4 312 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 NMES1Q9C002 83 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 OR2J1Q9GZK6 312 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 SPTBN4Q9H254 2564 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 TINAGQ9UJW2 476 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 BSNQ9UPA5 3926 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
VPS33A-209ENST00000544349 ANKRD30BLA7E2S9 258 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 SERPINE3A8MV23 424 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 F5H0A9 414 aaPredicted RBP12.23□□□□□ -0.45
VPS33A-209ENST00000544349 LILRA1O75019 489 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 CECR9P0C854 216 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 OPRM1P35372 400 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 TAS2R46P59540 309 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 ERVS71-1P61550 626 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 PXDC1Q5TGL8 231 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 ELP2Q6IA86 826 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 FAM169BQ8N8A8 192 aa12.23□□□□□ -0.45
VPS33A-209ENST00000544349 OR5AP2Q8NGF4 316 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms