RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 LGI3Q8N145 548 aa15.23■□□□□ 0.03
SCARB1-208ENST00000544327 OR5A2Q8NGI9 324 aa15.23■□□□□ 0.03
SCARB1-208ENST00000544327 CRIM1Q9NZV1 1036 aa15.23■□□□□ 0.03
SCARB1-208ENST00000544327 IL17BQ9UHF5 180 aa15.23■□□□□ 0.03
SCARB1-208ENST00000544327 AMDHD2Q9Y303 409 aa15.23■□□□□ 0.03
SCARB1-208ENST00000544327 JTBO76095 146 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 NAPSAO96009 420 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 OR2A2Q6IF42 318 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 LINC00596Q86U02 117 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 MKXQ8IYA7 352 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 ZFP62Q8NB50 900 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-208ENST00000544327 TAF9BQ9HBM6 251 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 WDFY3Q8IZQ1 3526 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 E5RGE8 158 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 DNASE2O00115 360 aaPredicted RBP15.22■□□□□ 0.03
SCARB1-208ENST00000544327 TSPAN4O14817 238 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 ATG12O94817 140 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 PPYP01298 95 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 SULT1A2P50226 295 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 RAB1AP62820 205 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 PLP2Q04941 152 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 PJVKQ0ZLH3 352 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 PDCD1Q15116 288 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 SP6Q3SY56 376 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 NUFIP2Q7Z417 695 aaKnown RBP15.22■□□□□ 0.03
SCARB1-208ENST00000544327 FAM219AQ8IW50 185 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 GLYATL2Q8WU03 294 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 SLAMF9Q96A28 289 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 ARV1Q9H2C2 271 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 Q9N2K0 584 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 OR2S2Q9NQN1 319 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 NSG2Q9Y328 171 aa15.22■□□□□ 0.03
SCARB1-208ENST00000544327 ZNF705EA8MWA4 302 aaPredicted RBP15.21■□□□□ 0.03
SCARB1-208ENST00000544327 TRIM77I1YAP6 450 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 LRP3O75074 770 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 MBPP02686 304 aaPredicted RBP15.21■□□□□ 0.03
SCARB1-208ENST00000544327 CCNOP22674 350 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 HAAOP46952 286 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 GPM6AP51674 278 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 RND3P61587 244 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 SRPXP78539 464 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 SLC10A1Q14973 349 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 PHLDA2Q53GA4 152 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 LDLRAD3Q86YD5 345 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 FOXRED2Q8IWF2 684 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 MCEMP1Q8IX19 187 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 OR4A4PQ8NGN8 299 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 GTF3AQ92664 365 aaKnown RBP15.21■□□□□ 0.03
SCARB1-208ENST00000544327 GP6Q9HCN6 339 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 ZC4H2Q9NQZ6 224 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 FBXL17Q9UF56 701 aa15.21■□□□□ 0.03
SCARB1-208ENST00000544327 FBXO9Q9UK97 447 aaPredicted RBP15.21■□□□□ 0.03
SCARB1-208ENST00000544327 ZNF732B4DXR9 585 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 ABCD4O14678 606 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 TNFSF15O95150 251 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 ZNF205O95201 554 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 CCL2P13500 99 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 DUSP1P28562 367 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 KCNJ3P48549 501 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 DEFA5Q01523 94 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 SMUG1Q53HV7 270 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 HES3Q5TGS1 186 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 LYZL2Q7Z4W2 148 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 OR5L1Q8NGL2 311 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 NARS2Q96I59 477 aaKnown RBP15.2■□□□□ 0.02
SCARB1-208ENST00000544327 NKX6-2Q9C056 277 aaPredicted RBP15.2■□□□□ 0.02
SCARB1-208ENST00000544327 PLK3Q9H4B4 646 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 MTCH1Q9NZJ7 389 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 CARHSP1Q9Y2V2 147 aaKnown RBP15.2■□□□□ 0.02
SCARB1-208ENST00000544327 TMED3Q9Y3Q3 217 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 LSM5Q9Y4Y9 91 aaKnown RBP15.2■□□□□ 0.02
SCARB1-208ENST00000544327 ZDBF2Q9HCK1 2354 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 CD300LBA8K4G0 201 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 CD46P15529 392 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 IL13RA2Q14627 380 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 GPR157Q5UAW9 335 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 DHRS13Q6UX07 377 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 UBAC2Q8NBM4 344 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 OR1K1Q8NGR3 316 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 OR5P3Q8WZ94 311 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 ZNF629Q9UEG4 869 aaPredicted RBP15.2■□□□□ 0.02
SCARB1-208ENST00000544327 MPC1Q9Y5U8 109 aa15.2■□□□□ 0.02
SCARB1-208ENST00000544327 TRBV6-6A0A0A6YYG2 114 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 OR5B21A6NL26 309 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 TRAPPC2LH3BP13 241 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 MPPED1O15442 326 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 GPR137BO60478 399 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 NGFP01138 241 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 RCC1P18754 421 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-208ENST00000544327 TMEM33P57088 247 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 BLOC1S1P78537 153 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 SVBPQ8N300 66 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 BOLLQ8N9W6 283 aaKnown RBP15.19■□□□□ 0.02
SCARB1-208ENST00000544327 OR11L1Q8NGX0 322 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 BCL2L2Q92843 193 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-208ENST00000544327 RIMS4Q9H426 269 aaPredicted RBP15.19■□□□□ 0.02
SCARB1-208ENST00000544327 LIPGQ9Y5X9 500 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 ARHGAP21Q5T5U3 1957 aa15.19■□□□□ 0.02
SCARB1-208ENST00000544327 CFAP54Q96N23 3096 aa15.18■□□□□ 0.02
SCARB1-208ENST00000544327 SIGLEC5O15389 551 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms