RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SH2D5Q6ZV89 423 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 ZNF547Q8IVP9 402 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 ANAPC16Q96DE5 110 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 TSPAN12O95859 305 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 HFEQ30201 348 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 RBPMS2Q6ZRY4 209 aaKnown RBP13.7□□□□□ -0.22
CHD4-210ENST00000544040 ABHD1Q96SE0 405 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 ZNF426Q9BUY5 554 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 TMSB15BA0A087X1C1 80 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 MKRN2OSH3BPM6 223 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 CHST1O43916 411 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 IGLV3-27P01718 113 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 MDH2P40926 338 aaKnown RBP13.7□□□□□ -0.22
CHD4-210ENST00000544040 PRSS41Q7RTY9 318 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 ZNF275Q9NSD4 429 aaPredicted RBP13.7□□□□□ -0.22
CHD4-210ENST00000544040 FGF9P31371 208 aaPredicted RBP13.7□□□□□ -0.22
CHD4-210ENST00000544040 COMPP49747 757 aaPredicted RBP13.7□□□□□ -0.22
CHD4-210ENST00000544040 ZG16BQ96DA0 208 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 WDFY2Q96P53 400 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 MIOXQ9UGB7 285 aa13.7□□□□□ -0.22
CHD4-210ENST00000544040 BVESQ8NE79 360 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 OR10AC1Q8NH08 325 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 TM4SF19Q96DZ7 209 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 PIK3IP1Q96FE7 263 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 GPR27Q9NS67 375 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 H7C2G1 150 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 CCR2P41597 374 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 FAM109BQ6ICB4 259 aaPredicted RBP13.69□□□□□ -0.22
CHD4-210ENST00000544040 LRRC75AQ8NAA5 344 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 TP53RKQ96S44 253 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 WDR13Q9H1Z4 485 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 LANCL1O43813 399 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 TMEM127O75204 238 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 DLX1P56177 255 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 ATP6V1FQ16864 119 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 CLEC18BQ6UXF7 455 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 DOLPP1Q86YN1 238 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 RAB33BQ9H082 229 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 RGPD8O14715 1765 aaPredicted RBP13.69□□□□□ -0.22
CHD4-210ENST00000544040 PDCD6O75340 191 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 SRSF10O75494 262 aaKnown RBP13.69□□□□□ -0.22
CHD4-210ENST00000544040 CXCL3P19876 107 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 ACP1P24666 158 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 FOXC1Q12948 553 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 GABRA6Q16445 453 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 OR52L2PQ8NGH6 319 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 R3HDM4Q96D70 268 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 NPAS1Q99742 590 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 GALNSP34059 522 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 BPIFA4PQ86YQ2 179 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 TBX15Q96SF7 602 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 LRRC37A3O60309 1634 aa13.69□□□□□ -0.22
CHD4-210ENST00000544040 TMEM218A2RU14 115 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 APCSP02743 223 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 WNT3P56703 355 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 LINC00615Q96LM1 132 aaPredicted RBP13.68□□□□□ -0.22
CHD4-210ENST00000544040 A6NDN8 102 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 M0R3E3 92 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 KCNAB3O43448 404 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 IGLV3-25P01717 112 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 FAM157CP0CG43 387 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 COL8A1P27658 744 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 OR10J1P30954 320 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 UQCRFS1P47985 274 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 CST9Q5W186 159 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 OR1L1Q8NH94 360 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 MDKP21741 143 aaPredicted RBP13.68□□□□□ -0.22
CHD4-210ENST00000544040 PRRX1P54821 245 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 TMEM196Q5HYL7 178 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 OR10A7Q8NGE5 316 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 PCED1AQ9H1Q7 454 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 MT-CO3P00414 261 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 OR4A8P0C604 315 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 NMUP48645 174 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 PHF7Q9BWX1 381 aaPredicted RBP13.68□□□□□ -0.22
CHD4-210ENST00000544040 FER1L6Q2WGJ9 1857 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 TMEM265A0A087WTH1 108 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 IGHV3-21A0A0B4J1V1 117 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 IFITM10A6NMD0 228 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 PAGE4O60829 102 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 STAG3L2P0CL84 134 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 ZNF250P15622 560 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 IL24Q13007 206 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 WFDC3Q8IUB2 231 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 OR1K1Q8NGR3 316 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 OR13G1Q8NGZ3 307 aa13.68□□□□□ -0.22
CHD4-210ENST00000544040 WNT5AP41221 380 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 C4AP0C0L4 1744 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 C4BP0C0L5 1744 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 TIAM2Q8IVF5 1701 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 CORTO00230 105 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 THSD4Q6ZMP0 1018 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 SSX8Q7RTT4 187 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 FGF14Q92915 247 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 ATG101Q9BSB4 218 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 SLC26A1Q9H2B4 701 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 NTMQ9P121 344 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 SNURFLB1AK76 121 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 SOCS1O15524 211 aa13.67□□□□□ -0.22
CHD4-210ENST00000544040 LSMEM1Q8N8F7 131 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms