RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 XPNPEP2O43895 674 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 MT-ND2P03891 347 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 DUSP1P28562 367 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 OR3A1P47881 315 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 NPBWR2P48146 333 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 RAB13P51153 203 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 ALDH3A2P51648 485 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 MRPL28Q13084 256 aaKnown RBP10.58□□□□□ -0.72
RTN3-212ENST00000543123 TCF23Q7RTU1 214 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 C16orf82Q7Z2V1 217 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 RTN4RL2Q86UN3 420 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 NDUFA11Q86Y39 141 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 SAXO1Q8IYX7 474 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 DYNAPQ8N1N2 210 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 CHST4Q8NCG5 386 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 OR4F17Q8NGA8 305 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 OR52N4Q8NGI2 321 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 ZNF596Q8TC21 504 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 PYDC1Q8WXC3 89 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 CREB3L1Q96BA8 519 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 OR4F4Q96R69 305 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 SERTAD4Q9NUC0 356 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 IL36RNQ9UBH0 155 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 GSTK1Q9Y2Q3 226 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 HILPDAQ9Y5L2 63 aa10.58□□□□□ -0.72
RTN3-212ENST00000543123 J3QLW9 94 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 J3QRE1 110 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 SIRPB1O00241 398 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 EI24O14681 340 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 MPZL2O60487 215 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 PSPNO60542 156 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 ZNF19P17023 458 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 BRS3P32247 399 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 CEACAM3P40198 252 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 VDAC2P45880 294 aaPredicted RBP10.57□□□□□ -0.72
RTN3-212ENST00000543123 SNU13P55769 128 aaKnown RBP10.57□□□□□ -0.72
RTN3-212ENST00000543123 HEPN1Q6WQI6 88 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 REC114Q7Z4M0 266 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 TPRX1Q8N7U7 411 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 OR13C9Q8NGT0 318 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 HAVCR2Q8TDQ0 301 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 Q96MT0 163 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 INPP5EQ9NRR6 644 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 TAS2R3Q9NYW6 316 aa10.57□□□□□ -0.72
RTN3-212ENST00000543123 TMEM212A6NML5 194 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 KDM4BO94953 1096 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 FADS2O95864 444 aaKnown RBP10.56□□□□□ -0.72
RTN3-212ENST00000543123 OR2H2O95918 312 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 CSN2P05814 226 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 HCKP08631 526 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 CCDC159P0C7I6 412 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 ZNF44P15621 663 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 PTGFRP43088 359 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 NANOS3P60323 173 aaKnown RBP10.56□□□□□ -0.72
RTN3-212ENST00000543123 BDH1Q02338 343 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 ALKBH1Q13686 389 aaKnown RBP10.56□□□□□ -0.72
RTN3-212ENST00000543123 HABP2Q14520 560 aaPredicted RBP10.56□□□□□ -0.72
RTN3-212ENST00000543123 KPNB1Q14974 876 aaKnown RBP10.56□□□□□ -0.72
RTN3-212ENST00000543123 NSUN5P1Q3KNT7 163 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 KPRPQ5T749 579 aaPredicted RBP10.56□□□□□ -0.72
RTN3-212ENST00000543123 CCBE1Q6UXH8 406 aaPredicted RBP10.56□□□□□ -0.72
RTN3-212ENST00000543123 SYS1Q8N2H4 156 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 ABHD12Q8N2K0 398 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 OR4D6Q8NGJ1 314 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 OR5D14Q8NGL3 314 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 CORO2AQ92828 525 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 RNF166Q96A37 237 aaPredicted RBP10.56□□□□□ -0.72
RTN3-212ENST00000543123 RFT1Q96AA3 541 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 PELI1Q96FA3 418 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 C4orf36Q96KX1 117 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 COMMD4Q9H0A8 199 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 ZCCHC4Q9H5U6 513 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 DPM3Q9P2X0 92 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 EXOGQ9Y2C4 368 aaKnown RBP10.56□□□□□ -0.72
RTN3-212ENST00000543123 GMPPBQ9Y5P6 360 aa10.56□□□□□ -0.72
RTN3-212ENST00000543123 ODAMA1E959 279 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 OR4C45A6NMZ5 311 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 FAM90A22PA8MWA6 464 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 LEUTXA8MZ59 168 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 G3V4G9 280 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 TOR1AO14656 332 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 SULT1B1O43704 296 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 ALX3O95076 343 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 DBTP11182 482 aaKnown RBP10.55□□□□□ -0.72
RTN3-212ENST00000543123 CDK2P24941 298 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 LMO1P25800 156 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 GALEQ14376 348 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 BEAN1Q3B7T3 259 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 LDLRAD2Q5SZI1 272 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 PRAMEF5Q5TYX0 476 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 CCDC144NLQ6NUI1 221 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 SERPINA12Q8IW75 414 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 OR5D18Q8NGL1 313 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 OR4P4Q8NGL7 312 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 STMN2Q93045 179 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 R3HDM4Q96D70 268 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 ALG8Q9BVK2 526 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 WNT10AQ9GZT5 417 aa10.55□□□□□ -0.72
RTN3-212ENST00000543123 LIN7BQ9HAP6 207 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms