RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PON3Q15166 354 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 KYAT1Q16773 422 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 C5orf47Q569G3 176 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 EOGTQ5NDL2 527 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 RFLNAQ6ZTI6 216 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 CRLF3Q8IUI8 442 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 TMEM61Q8N0U2 210 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF786Q8N393 782 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 PNKDQ8N490 385 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 CBR4Q8N4T8 237 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 POM121L12Q8N7R1 296 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 WDSUB1Q8N9V3 476 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 RNASE11Q8TAA1 199 aaKnown RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 RAB2BQ8WUD1 216 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 FAM151AQ8WW52 585 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 TCEAL3Q969E4 200 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ZHX1-C8orf76Q96EF9 292 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF514Q96K75 400 aaPredicted RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 BTN2A3PQ96KV6 586 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 PPP3R2Q96LZ3 170 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF681Q96N22 645 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF285Q96NJ3 590 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ZFP3Q96NJ6 502 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 OR52B2Q96RD2 323 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 PAXXQ9BUH6 204 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 BEX2Q9BXY8 128 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 GABARAPL3Q9BY60 117 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 SAV1Q9H4B6 383 aaPredicted RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 REEP1Q9H902 201 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF702PQ9H963 129 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 EFCAB1Q9HAE3 211 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 C6orf50Q9HD87 102 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 BIN3Q9NQY0 253 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 CCL28Q9NRJ3 127 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 PLSCR3Q9NRY6 295 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 SDHAF2Q9NX18 166 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 RBAKQ9NYW8 714 aaPredicted RBP2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 VAPAQ9P0L0 249 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 TBX21Q9UL17 535 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 SCML1Q9UN30 329 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 CROCCQ5TZA2 2017 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 DNAH14Q0VDD8 3507 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 NAV2Q8IVL1 2488 aa2.93□□□□□ -1.94
SFSWAP-211ENST00000542813 PCM1Q15154 2024 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 DMDP11532 3685 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 hCG_1818297A0A087WSY0 165 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 A0A087WYN8 130 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 A0A0J9YWU9 116 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 TCRBV3S1A0A5B6 114 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 KRBOX1C9JBD0 128 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SMLR1H3BR10 107 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 H7C2Y5 167 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 PLIN3O60664 434 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF354AO60765 605 aaPredicted RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 UPK1BO75841 260 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SCO1O75880 301 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SLC22A5O76082 557 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 RAB3DO95716 219 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 TIMP1P01033 207 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 IFNGP01579 166 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SERPINE1P05121 402 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 HTR1AP08908 422 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SLC35E2BP0CK96 405 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 RNF224P0DH78 156 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 PGA5P0DJD9 388 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 OR5H8P0DN80 308 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 FOLR2P14207 255 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 IL9P15248 144 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 CBR1P16152 277 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 ZNF30P17039 623 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SPI1P17947 270 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 WARSP23381 471 aaKnown RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 CD79BP40259 229 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 RBM34P42696 430 aaKnown RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 RPL35P42766 123 aaKnown RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 MAGEA6P43360 314 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 KIR3DL2P43630 455 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 PSMD8P48556 350 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SERPINB10P48595 397 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 PRLHRP49683 370 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 VEGFCP49767 419 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SERPINB9P50453 376 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 NUDT2P50583 147 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 FGF8P55075 233 aaPredicted RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 SNAP25P60880 206 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 GLO1Q04760 184 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 ST3GAL4Q11206 333 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 STX4Q12846 297 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 OR4D1Q15615 310 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 NEDD8Q15843 81 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 HSD17B12Q53GQ0 312 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 PAGE3Q5JUK9 113 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 ACTL10Q5JWF8 245 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 RNLSQ5VYX0 342 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 TMEM236Q5W0B7 351 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 XAF1Q6GPH4 301 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 TTC33Q6PID6 262 aaPredicted RBP2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 EPGNQ6UW88 154 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 ABHD13Q7L211 337 aa2.92□□□□□ -1.94
SFSWAP-211ENST00000542813 GALNT10Q86SR1 603 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms