RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 TUBAL3A6NHL2 446 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 IQCF6A8MYZ5 107 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 LEUTXA8MZ59 168 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 SPINK2P20155 84 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 IL13RA2Q14627 380 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 GSG1LQ6UXU4 331 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 LINC00596Q86U02 117 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 ZNF546Q86UE3 836 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 OR8H3Q8N146 312 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 ZNF610Q8N9Z0 462 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 POC1AQ8NBT0 407 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 SLC25A40Q8TBP6 338 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 MOB3AQ96BX8 217 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 CCDC120Q96HB5 630 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 RNF126Q9BV68 326 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 WDR13Q9H1Z4 485 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 Q9N2K0 584 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 C14orf166Q9Y224 244 aaKnown RBP12.08□□□□□ -0.48
LDB3-207ENST00000542786 FAM215AQ9Y5M1 114 aa12.08□□□□□ -0.48
LDB3-207ENST00000542786 MPTX1A8MV57 137 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 FAM25EA8MYX2 175 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 EEF1E1-BLOC1S5C9J1V9 151 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 C3orf80F5H4A9 247 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 H0YIZ8 118 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 WDR1O75083 606 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 RP2O75695 350 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 RHBDL1O75783 438 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 LYL1P12980 280 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 MPV17P39210 176 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 UCP2P55851 309 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 UCP3P55916 312 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 ERVK11-1P61568 191 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 PSG7Q13046 419 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 MRPL49Q13405 166 aaKnown RBP12.07□□□□□ -0.48
LDB3-207ENST00000542786 ZNF585AQ6P3V2 769 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 CXorf67Q86X51 503 aaPredicted RBP12.07□□□□□ -0.48
LDB3-207ENST00000542786 C17orf78Q8N4C9 275 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 COQ8AQ8NI60 647 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 GTF3AQ92664 365 aaKnown RBP12.07□□□□□ -0.48
LDB3-207ENST00000542786 OPN3Q9H1Y3 402 aaPredicted RBP12.07□□□□□ -0.48
LDB3-207ENST00000542786 PLK3Q9H4B4 646 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 LOC400499M0QZD8 3231 aa12.07□□□□□ -0.48
LDB3-207ENST00000542786 TRBV6-6A0A0A6YYG2 114 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 TRAV24A0A0B4J272 114 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 LRP5LA4QPB2 252 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 OR2F2O95006 317 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 AGFG2O95081 481 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 ZNF728P0DKX0 622 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 PRKACAP17612 351 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 OR2F1Q13607 317 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 PIK3IP1Q96FE7 263 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 OR10C1Q96KK4 312 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 RTL8AQ9BWD3 113 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 GSX2Q9BZM3 304 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 COMMD9Q9P000 198 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 MBD2Q9UBB5 411 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 SHANK1Q9Y566 2161 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 A0A0D9SG52 128 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 C5orf51A6NDU8 294 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 KNG1P01042 644 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 IFNA2P01563 188 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 GLAP06280 429 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 PSMB6P28072 239 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 DUSP1P28562 367 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 FCGR2CP31995 323 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 P2RY6Q15077 328 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 PLEKHN1Q494U1 663 aaPredicted RBP12.06□□□□□ -0.48
LDB3-207ENST00000542786 LRRC37A5PQ49AS3 106 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 Q6P435 159 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 ZNF880Q6PDB4 577 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 C5orf24Q7Z6I8 188 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 FAM58AQ8N1B3 248 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 RHOFQ9HBH0 211 aa12.06□□□□□ -0.48
LDB3-207ENST00000542786 CHMP1AQ9HD42 196 aaPredicted RBP12.06□□□□□ -0.48
LDB3-207ENST00000542786 C13orf42A0A1B0GVH6 325 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 CECR9P0C854 216 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 AADACP22760 399 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 CYCSP99999 105 aaKnown RBP12.05□□□□□ -0.48
LDB3-207ENST00000542786 RBM39Q14498 530 aaKnown RBP12.05□□□□□ -0.48
LDB3-207ENST00000542786 HERPUD1Q15011 391 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 IGSF11Q5DX21 431 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 SLC51BQ86UW2 128 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 FAM169BQ8N8A8 192 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 SUMF2Q8NBJ7 301 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 SCCPDHQ8NBX0 429 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 OR1J1Q8NGS3 322 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 MRPL30Q8TCC3 161 aaKnown RBP12.05□□□□□ -0.48
LDB3-207ENST00000542786 KLF14Q8TD94 323 aaPredicted RBP12.05□□□□□ -0.48
LDB3-207ENST00000542786 PCNPQ8WW12 178 aaKnown RBP12.05□□□□□ -0.48
LDB3-207ENST00000542786 GALNT14Q96FL9 552 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 MICU1Q9BPX6 476 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 SLX1AQ9BQ83 275 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 NRIP2Q9BQI9 281 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 RSRP1Q9BUV0 290 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 C1QTNF6Q9BXI9 259 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 OBP2BQ9NPH6 170 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 PROCRQ9UNN8 238 aa12.05□□□□□ -0.48
LDB3-207ENST00000542786 ZFHX4Q86UP3 3567 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 IGKV1-6A0A0C4DH72 117 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 KCNJ3P48549 501 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms