RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 PGA3P0DJD8 388 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 OR13C7P0DN81 318 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF19P17023 458 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 CORO1AP31146 461 aaKnown RBP5.03□□□□□ -1.6
XRCC4-206ENST00000542685 DCTDP32321 178 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 CYB561P49447 251 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 TRA2BP62995 288 aaKnown RBP5.03□□□□□ -1.6
XRCC4-206ENST00000542685 HMGCS1Q01581 520 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 PAX2Q02962 417 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 NFATC2Q13469 925 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 PDE7AQ13946 482 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 SLC25A35Q3KQZ1 300 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 MPPE1Q53F39 396 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 ACSM3Q53FZ2 586 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 PDZD11Q5EBL8 140 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 LDLRAD2Q5SZI1 272 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 SDHAF4Q5VUM1 108 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 FAM219BQ5XKK7 198 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 FRG2Q64ET8 278 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 FAM71F2Q6NXP2 309 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 NOXRED1Q6NXP6 359 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 RPUSD3Q6P087 351 aaKnown RBP5.03□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF621Q6ZSS3 439 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 DEFB128Q7Z7B8 93 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 DND1Q8IYX4 353 aaKnown RBP5.03□□□□□ -1.6
XRCC4-206ENST00000542685 ZNF101Q8IZC7 436 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 SYS1Q8N2H4 156 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 C17orf78Q8N4C9 275 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 AMER3Q8N944 861 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 OR52E1Q8NGJ3 308 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 OR1K1Q8NGR3 316 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 OR52J3Q8NH60 311 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 BCL2L2Q92843 193 aaPredicted RBP5.03□□□□□ -1.6
XRCC4-206ENST00000542685 IGSF8Q969P0 613 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 DDIT4LQ96D03 193 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 SLC25A38Q96DW6 304 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 LRRC3BQ96PB8 259 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 FRG2BQ96QU4 278 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 FAM110AQ9BQ89 295 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 OR11A1Q9GZK7 315 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 EIF5A2Q9GZV4 153 aaKnown RBP5.03□□□□□ -1.6
XRCC4-206ENST00000542685 RAB18Q9NP72 206 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 SPANXA1Q9NS26 97 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 MDFICQ9P1T7 246 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 KIAA1456Q9P272 454 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 RAB22AQ9UL26 194 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 RNF150Q9ULK6 438 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 NPIPA1Q9UND3 350 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 PPP1R3CQ9UQK1 317 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 LAMTOR2Q9Y2Q5 125 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 CSAG2Q9Y5P2 127 aa5.03□□□□□ -1.6
XRCC4-206ENST00000542685 CKAP5Q14008 2032 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 VWA8A3KMH1 1905 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 HELZP42694 1942 aaKnown RBP5.02□□□□□ -1.61
XRCC4-206ENST00000542685 PIKFYVEQ9Y2I7 2098 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 TRBV4-1A0A0J9YWV2 114 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 NKX2-6A6NCS4 301 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 VSTM2BA6NLU5 285 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF716A6NP11 495 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 OR11H12B2RN74 326 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 H3BQ15 152 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 PEX12O00623 359 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 RBFOX2O43251 390 aaKnown RBP eCLIP5.02□□□□□ -1.61
XRCC4-206ENST00000542685 VAMP5O95183 116 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 HLA-AP01891 365 aaKnown RBP5.02□□□□□ -1.61
XRCC4-206ENST00000542685 HBE1P02100 147 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 THY1P04216 161 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 TYMSP04818 313 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 PCCBP05166 539 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 OR8U9P0C7N5 309 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF735P0CB33 412 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 OR12D1P0DN82 309 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 ESDP10768 282 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 FCGR2AP12318 317 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 COX7A2P14406 83 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 AK4P27144 223 aaPredicted RBP5.02□□□□□ -1.61
XRCC4-206ENST00000542685 CMPK1P30085 196 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 NSG1P42857 185 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 GABRA2P47869 451 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 SLC6A8P48029 635 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 ATP5IP56385 69 aaPredicted RBP5.02□□□□□ -1.61
XRCC4-206ENST00000542685 CCL7P80098 99 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 PLPPR5Q32ZL2 321 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 SNAI3Q3KNW1 292 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 SLC22A6Q4U2R8 563 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 LRRC10Q5BKY1 277 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 OR4A47Q6IF82 309 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 PWWP2BQ6NUJ5 590 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 WDR74Q6RFH5 385 aaPredicted RBP5.02□□□□□ -1.61
XRCC4-206ENST00000542685 DPPA3Q6W0C5 159 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 PRSS45Q7RTY3 260 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 MRPL21Q7Z2W9 205 aaKnown RBP5.02□□□□□ -1.61
XRCC4-206ENST00000542685 TMEM144Q7Z5S9 345 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 C17orf64Q86WR6 236 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 NIT1Q86X76 327 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 ZNF679Q8IYX0 411 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 SELENOHQ8IZQ5 122 aaKnown RBP5.02□□□□□ -1.61
XRCC4-206ENST00000542685 ZFP41Q8N8Y5 198 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 CLEC1AQ8NC01 280 aa5.02□□□□□ -1.61
XRCC4-206ENST00000542685 OR11H1Q8NG94 326 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms