RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ZFP36L1Q07352 338 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SMCO1Q147U7 214 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 RSU1Q15404 277 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 OR8B8Q15620 311 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 HMGN3Q15651 99 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 RIPPLY2Q5TAB7 128 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 GPR157Q5UAW9 335 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SHEQ5VZ18 495 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF774Q6NX45 483 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 Q6ZPA2 131 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 Q6ZS49 121 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 OR10AD1Q8NGE0 317 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 OR2Y1Q8NGV0 311 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 OR2AE1Q8NHA4 323 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 IFI44Q8TCB0 444 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 GLYATL2Q8WU03 294 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 KCNE4Q8WWG9 221 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 HPSE2Q8WWQ2 592 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 RTN4IP1Q8WWV3 396 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 ERGIC1Q969X5 290 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SPSB4Q96A44 273 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 MOB3AQ96BX8 217 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 MSI2Q96DH6 328 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 MARS2Q96GW9 593 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SGCZQ96LD1 299 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 TECTBQ96PL2 329 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 CMSS1Q9BQ75 279 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 GINS3Q9BRX5 216 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 PRDM14Q9GZV8 571 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 WNT5BQ9H1J7 359 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 SAV1Q9H4B6 383 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 C11orf1Q9H5F2 150 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 BCO1Q9HAY6 547 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 ELL3Q9HB65 397 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 WFDC1Q9HC57 220 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 CACFD1Q9UGQ2 172 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 MLXQ9UH92 298 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 ZDHHC8Q9ULC8 765 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 KCNIP3Q9Y2W7 256 aa4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 MRPS18CQ9Y3D5 142 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 PTRH2Q9Y3E5 179 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 RIF1Q5UIP0 2472 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM230AA0A1W2PPH8 454 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF850A8MQ14 1090 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 C9J4A7 227 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 G3V3Y1 287 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 GEMIN2O14893 280 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 GPR137BO60478 399 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 PDCD6O75340 191 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 NRASP01111 189 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 LCATP04180 440 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 CRYBA1P05813 215 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 MMP7P09237 267 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 OR5AC1P0C628 307 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 OR8U9P0C7N5 309 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SPP1P10451 314 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 PRKACAP17612 351 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 NFYBP25208 207 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 OPRM1P35372 400 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SNCAP37840 140 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FUT6P51993 359 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 PSG4Q00888 419 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF92Q03936 586 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 CHAF1BQ13112 559 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 PDZK1IP1Q13113 114 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 IL13RA2Q14627 380 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SRSF7Q16629 238 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 PIGYQ3MUY2 71 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 NRN1LQ496H8 165 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 AVPI1Q5T686 147 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 PMS2CLQ68D20 193 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM211Q6ICI0 200 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 Q6ZRG5 221 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 LYZL2Q7Z4W2 148 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FOXRED2Q8IWF2 684 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FBXL14Q8N1E6 418 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 OSR2Q8N2R0 312 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 OR4D5Q8NGN0 318 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 OR8U1Q8NH10 309 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 RXFP4Q8TDU9 374 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 EDARADDQ8WWZ3 215 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 MR1Q95460 341 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 BORCS8Q96FH0 119 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 BSCL2Q96G97 398 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 KIRREL1Q96J84 757 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 OR2H1Q9GZK4 316 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 ESRP2Q9H6T0 727 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 CRLF2Q9HC73 371 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FSCN3Q9NQT6 498 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 BIN3Q9NQY0 253 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SLC2A9Q9NRM0 540 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM212BQ9NTI7 297 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 GFOD1Q9NXC2 390 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 COA4Q9NYJ1 87 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 SIT1Q9Y3P8 196 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 LSM5Q9Y4Y9 91 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 KPTNQ9Y664 436 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 VPS13AQ96RL7 3174 aa4.48□□□□□ -1.69
ATPAF1-212ENST00000542495 MYO7BQ6PIF6 2116 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms