RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 PISDQ9UG56 409 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 ASPMQ8IZT6 3477 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 A0A0J9YW62 118 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 A0A1W2PNV4 684 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 DHHO43323 396 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 EIF1BO60739 113 aaKnown RBP13.3□□□□□ -0.28
CNOT9-208ENST00000542068 P04436 131 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 TAGLN2P37802 199 aaKnown RBP13.3□□□□□ -0.28
CNOT9-208ENST00000542068 FOLR3P41439 243 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 EIF1P41567 113 aaKnown RBP13.3□□□□□ -0.28
CNOT9-208ENST00000542068 TMEM187Q14656 261 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 RSPO1Q2MKA7 263 aaPredicted RBP13.3□□□□□ -0.28
CNOT9-208ENST00000542068 C4orf17Q53FE4 359 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 VASH2Q86V25 355 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 SLC35G3Q8N808 338 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 PIGCQ92535 297 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 CHST5Q9GZS9 411 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 LIPGQ9Y5X9 500 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 HS3ST3B1Q9Y662 390 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 IGKV1-27A0A075B6S5 117 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 AP4M1O00189 453 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 GAPDHP04406 335 aaKnown RBP13.3□□□□□ -0.28
CNOT9-208ENST00000542068 CCL2P13500 99 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 HTR5AP47898 357 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 ZNF84P51523 738 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 ENDOGQ14249 297 aaKnown RBP13.3□□□□□ -0.28
CNOT9-208ENST00000542068 CARFQ8N187 725 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 EDARADDQ8WWZ3 215 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 R4GN57 208 aa13.3□□□□□ -0.28
CNOT9-208ENST00000542068 PRR14LQ5THK1 2151 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 A0A096LPE4 126 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 A0A1W2PPZ6 126 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 GPR137BO60478 399 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 MDKP21741 143 aaPredicted RBP13.29□□□□□ -0.28
CNOT9-208ENST00000542068 AADACP22760 399 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 CHATP28329 748 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 EIF2S3P41091 472 aaKnown RBP13.29□□□□□ -0.28
CNOT9-208ENST00000542068 OR1J1Q8NGS3 322 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 RHBDD1Q8TEB9 315 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 TP53RKQ96S44 253 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 PBDC1Q9BVG4 233 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 TUBD1Q9UJT1 453 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 UBE2J1Q9Y385 318 aaPredicted RBP13.29□□□□□ -0.28
CNOT9-208ENST00000542068 IGLV3-12A0A075B6K2 115 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 IGHV3-64DA0A0J9YX35 117 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 AQP7P3A6NL99 342 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 EPHA1P21709 976 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 DUSP1P28562 367 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 P2RY1P47900 373 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 RPS23P62266 143 aaKnown RBP13.29□□□□□ -0.28
CNOT9-208ENST00000542068 HIST2H3AQ71DI3 136 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 Q96M66 194 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 PFDN5Q99471 154 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 ST3GAL6Q9Y274 331 aa13.29□□□□□ -0.28
CNOT9-208ENST00000542068 FOLR2P14207 255 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 GDF1P27539 372 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 UBE2KP61086 200 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 PCOLCEQ15113 449 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 GPR137CQ8N3F9 429 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 NEK7Q8TDX7 302 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 HDGFL3Q9Y3E1 203 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 BDP1A6H8Y1 2624 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 CARD18P57730 90 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 RAB2AP61019 212 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.28
CNOT9-208ENST00000542068 CXorf66Q5JRM2 361 aaPredicted RBP13.28□□□□□ -0.28
CNOT9-208ENST00000542068 NSUN5P2Q63ZY6 315 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 LINC00469Q8N7U9 141 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 OR10AD1Q8NGE0 317 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 FOXI3A8MTJ6 420 aaPredicted RBP13.28□□□□□ -0.28
CNOT9-208ENST00000542068 IFNA17P01571 189 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 ATP6V0CP27449 155 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 SURF2Q15527 256 aaPredicted RBP13.28□□□□□ -0.28
CNOT9-208ENST00000542068 HMGN3Q15651 99 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 LIAT1Q6ZQX7 453 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 AAED1Q7RTV5 226 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 MAML2Q8IZL2 1156 aaPredicted RBP13.28□□□□□ -0.28
CNOT9-208ENST00000542068 TMEM123Q8N131 208 aa13.28□□□□□ -0.28
CNOT9-208ENST00000542068 LY6G6EA0A0G2JKS1 128 aa13.27□□□□□ -0.28
CNOT9-208ENST00000542068 RFPL3SP0C7P2 107 aa13.27□□□□□ -0.28
CNOT9-208ENST00000542068 SEC11BP0C7V7 166 aa13.27□□□□□ -0.28
CNOT9-208ENST00000542068 CCL1P22362 96 aa13.27□□□□□ -0.28
CNOT9-208ENST00000542068 SLC25A24Q6NUK1 477 aa13.27□□□□□ -0.28
CNOT9-208ENST00000542068 SPTSSAQ969W0 71 aa13.27□□□□□ -0.28
CNOT9-208ENST00000542068 FAM86C1Q9NVL1 165 aa13.27□□□□□ -0.28
CNOT9-208ENST00000542068 U3KQA8 63 aa13.27□□□□□ -0.28
CNOT9-208ENST00000542068 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.29
CNOT9-208ENST00000542068 DOCK10Q96BY6 2186 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 COL4A2P08572 1712 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 NPIPB13A6NJU9 1138 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 NPIPB4C9JG80 1138 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 UMODP07911 640 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 GNRHRP30968 328 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 VAMP2P63027 116 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 ZNF239Q16600 458 aaKnown RBP13.27□□□□□ -0.29
CNOT9-208ENST00000542068 IZUMO4Q1ZYL8 232 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 GFI1BQ5VTD9 330 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 MYPOPQ86VE0 399 aaPredicted RBP13.27□□□□□ -0.29
CNOT9-208ENST00000542068 LGI3Q8N145 548 aa13.27□□□□□ -0.29
CNOT9-208ENST00000542068 SSC4DQ8WTU2 575 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms