RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 EIF2B1Q14232 305 aaKnown RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ATP6AP1Q15904 470 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 PCK2Q16822 640 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 KRTAP27-1Q3LI81 207 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 KLHL12Q53G59 568 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 KRBOX4Q5JUW0 171 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 LCN1P1Q5VSP4 162 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 OTPQ5XKR4 325 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 OR2T2Q6IF00 324 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ACSM5Q6NUN0 579 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 PLBD1Q6P4A8 553 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 RBPMS2Q6ZRY4 209 aaKnown RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 Q75L30 129 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF767PQ75MW2 155 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 MRPL21Q7Z2W9 205 aaKnown RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 DCXRQ7Z4W1 244 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM179BQ7Z7N9 219 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM219Q86XT9 240 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF283Q8N7M2 679 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 OR8G5Q8NG78 346 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 OR51L1Q8NGJ5 315 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 OR6N2Q8NGY6 317 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ST7LQ8TDW4 575 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 SPRYD4Q8WW59 207 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 GIMAP1Q8WWP7 306 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 FCGR1BQ92637 280 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 YIPF5Q969M3 257 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 SLCO4A1Q96BD0 722 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 SLAMF6Q96DU3 332 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF799Q96GE5 643 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 CCDC32Q9BV29 185 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 NMNAT2Q9BZQ4 307 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 WDR76Q9H967 626 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 SLC25A19Q9HC21 320 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 DDX28Q9NUL7 540 aaKnown RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 MRPL22Q9NWU5 206 aaKnown RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 SMPD3Q9NY59 655 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 TVP23BQ9NYZ1 205 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ENPP5Q9UJA9 477 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 ZNF221Q9UK13 617 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 PPP1R3CQ9UQK1 317 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 CAB39Q9Y376 341 aaPredicted RBP4.49□□□□□ -1.69
CPSF7-220ENST00000541963 HSPE1-MOB4S4R3N1 261 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 CELSR1Q9NYQ6 3014 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 PLCE1Q9P212 2302 aa4.49□□□□□ -1.69
CPSF7-220ENST00000541963 CR1P17927 2039 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 CHD3Q12873 2000 aaKnown RBP4.48□□□□□ -1.69
CPSF7-220ENST00000541963 HIVEP1P15822 2718 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 ZSCAN5BA6NJL1 495 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 FAM183AA6NL82 134 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 CENPXA8MT69 81 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 IQCF6A8MYZ5 107 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 LOC110117498-PIK3R3F6TDL0 507 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 XRCC2O43543 280 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 GMDSO60547 372 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 RP2O75695 350 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 GABARAPO95166 117 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 H2BFMP0C1H6 154 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 SBK2P0C263 348 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 FAM157CP0CG43 387 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 CLUP10909 449 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 ERFP50548 548 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 DAPP51397 102 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 PRKXP51817 358 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 RAB25P57735 213 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 CXCR4P61073 352 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 MRPS15P82914 257 aaKnown RBP4.48□□□□□ -1.69
CPSF7-220ENST00000541963 KRTAP1-1Q07627 177 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 BAMBIQ13145 260 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 GK2Q14410 553 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-220ENST00000541963 PTGES3Q15185 160 aaKnown RBP4.48□□□□□ -1.69
CPSF7-220ENST00000541963 IZUMO4Q1ZYL8 232 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 RSPO1Q2MKA7 263 aaPredicted RBP4.48□□□□□ -1.69
CPSF7-220ENST00000541963 GPR107Q5VW38 600 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 FAHD1Q6P587 224 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 DPY19L4Q7Z388 723 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 NAA40Q86UY6 237 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 HS3ST5Q8IZT8 346 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 OR5AS1Q8N127 324 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 FTMTQ8N4E7 242 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 SPICQ8N5J4 248 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 OR52H1Q8NGJ2 320 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 OR11L1Q8NGX0 322 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 OR51F2Q8NH61 342 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 CLDND2Q8NHS1 167 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 THEM6Q8WUY1 208 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 ZNRF4Q8WWF5 429 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 PKP2Q99959 881 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 GAL3ST1Q99999 423 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 SLC30A2Q9BRI3 323 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 DCUN1D5Q9BTE7 237 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 RGCCQ9H4X1 137 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 NARFLQ9H6Q4 476 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 NIPAL2Q9H841 368 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 NTN4Q9HB63 628 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 NEK6Q9HC98 313 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 TMEM106BQ9NUM4 274 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 LAMP5Q9UJQ1 280 aa4.48□□□□□ -1.69
CPSF7-220ENST00000541963 WIPI2Q9Y4P8 454 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms