RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SRP14P37108 136 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 LIMS1P48059 325 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 MTCH2Q9Y6C9 303 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 ZFC3H1O60293 1989 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 A0A1B0GU03 582 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 LSM6P62312 80 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 MLF2Q15773 248 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 OR1L4Q8NGR5 311 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 ADAMTS17Q8TE56 1095 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 COX14Q96I36 57 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 THOC3Q96J01 351 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 IP6K3Q96PC2 410 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 GPA33Q99795 319 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 SIRT4Q9Y6E7 314 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 CXCL10P02778 98 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 STAG3L2P0CL84 134 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 ATP6V0CP27449 155 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 YBX1P67809 324 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 TMEM211Q6ICI0 200 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 LNP1A1A4G5 178 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 F12P00748 615 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 VSIG8P0DPA2 414 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 GALNSP34059 522 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 ZNF343Q6P1L6 599 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 ACY3Q96HD9 319 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 SLC26A1Q9H2B4 701 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 ZMIZ1Q9ULJ6 1067 aa13.24□□□□□ -0.29
SMARCA4-207ENST00000541122 CACNA1CQ13936 2221 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 OR5B21A6NL26 309 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 BMPR1BO00238 502 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 EIF3GO75821 320 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 BCL2P10415 239 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 CDX1P47902 265 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 RAB7AP51149 207 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 PRDX4Q13162 271 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 OR11H4Q8NGC9 324 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 RGP1Q92546 391 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 ALKBH3Q96Q83 286 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 METTL1Q9UBP6 276 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 TRGV10A0A0A0MS01 117 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 MMP16P51512 607 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 HES1Q14469 280 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 DMRTC1Q5HYR2 192 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 ANKRD33Q7Z3H0 272 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 OR5D13Q8NGL4 314 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 TBX15Q96SF7 602 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 LRFN3Q9BTN0 628 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 WDR13Q9H1Z4 485 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 PRR13Q9NZ81 148 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 KLK13Q9UKR3 277 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 A0A1W2PPC4 97 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 PPYP01298 95 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 TECRQ9NZ01 308 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 BTAF1O14981 1849 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 SLC25A5P05141 298 aaKnown RBP13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 F2RP25116 425 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 GFERP55789 205 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 SERF2P84101 59 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 VMA21Q3ZAQ7 101 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 C6orf15Q6UXA7 325 aaPredicted RBP13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 MRGPRX1Q96LB2 322 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 AQP10Q96PS8 301 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 TBX21Q9UL17 535 aa13.23□□□□□ -0.29
SMARCA4-207ENST00000541122 CD160O95971 181 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 TMIGD3P0DMS9 266 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 GPR3P46089 330 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 EFNB2P52799 333 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 PABPC1L2AQ5JQF8 200 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 PARM1Q6UWI2 310 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 ZNF547Q8IVP9 402 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 MRPL30Q8TCC3 161 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 C8orf44Q96CB5 159 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 GMPPAQ96IJ6 420 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 MAP1LC3CQ9BXW4 147 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 ADAMTS7Q9UKP4 1686 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 SPINK4O60575 86 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 OR2A4O95047 310 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 HIST3H3Q16695 136 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 ZNF385CQ66K41 422 aaPredicted RBP13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 LAIR2Q6ISS4 152 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 C11orf42Q8N5U0 333 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 ZNF738Q8NE65 137 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 ABHD14BQ96IU4 210 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 OR2A7Q96R45 310 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 AAMDCQ9H7C9 122 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 TCF21O43680 179 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 PPOXP50336 477 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 RNF133Q8WVZ7 376 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 SF3B6Q9Y3B4 125 aaKnown RBP13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 TRBV5-5A0A0J9YX44 114 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 CT62P0C5K7 136 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 TMEM11P17152 192 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 GNB1P62873 340 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 COL19A1Q14993 1142 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 SLC7A10Q9NS82 523 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 NAGKQ9UJ70 344 aa13.22□□□□□ -0.29
SMARCA4-207ENST00000541122 SPTY2D1-AS1A0A0U1RR47 76 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 SCGB1C2P0DMR2 95 aa13.21□□□□□ -0.29
SMARCA4-207ENST00000541122 DHRS11Q6UWP2 260 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms