RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 RHBDD3Q9Y3P4 386 aa7.13□□□□□ -1.27
CHD4-208ENST00000540960 TRAPPC2LH3BP13 241 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 OVOL3O00110 214 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 LANCL1O43813 399 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 CREBL2O60519 120 aaPredicted RBP7.12□□□□□ -1.27
CHD4-208ENST00000540960 IGKV3-15P01624 115 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 MT-ND4P03905 459 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 FCER2P06734 321 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 ACAA1P09110 424 aaPredicted RBP7.12□□□□□ -1.27
CHD4-208ENST00000540960 PATE4P0C8F1 98 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 PPP3CBP16298 524 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 ZNF14P17017 642 aaPredicted RBP7.12□□□□□ -1.27
CHD4-208ENST00000540960 NAT1P18440 290 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 DTYMKP23919 212 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 BLVRBP30043 206 aaPredicted RBP7.12□□□□□ -1.27
CHD4-208ENST00000540960 GCH1P30793 250 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 OR3A4PP47883 348 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 OR3A3P47888 321 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 EFNB2P52799 333 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 PPP1CBP62140 327 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 FOXF2Q12947 444 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 GRK1Q15835 563 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 MPV17LQ2QL34 196 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 HIKESHIQ53FT3 197 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 NHLRC3Q5JS37 347 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 VAX1Q5SQQ9 334 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 C9orf135Q5VTT2 229 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 ELP2Q6IA86 826 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 TRAPPC6BQ86SZ2 158 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 TCTE3Q8IZS6 198 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 OSR2Q8N2R0 312 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 PAQR4Q8N4S7 273 aaPredicted RBP7.12□□□□□ -1.27
CHD4-208ENST00000540960 CELF2-AS1Q8N7Q2 184 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 ZDHHC22Q8N966 263 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 C9orf106Q8NAJ2 232 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 Q8NFD4 153 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 OR56B2PQ8NGI1 322 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 OR8S1Q8NH09 359 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 OR51F2Q8NH61 342 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 GTF3AQ92664 365 aaKnown RBP7.12□□□□□ -1.27
CHD4-208ENST00000540960 C20orf85Q9H1P6 137 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 OR51J1Q9H342 316 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 RANBP3Q9H6Z4 567 aaPredicted RBP7.12□□□□□ -1.27
CHD4-208ENST00000540960 NGBQ9NPG2 151 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 GPR173Q9NS66 373 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 PLEKHJ1Q9NW61 149 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 NDRG3Q9UGV2 375 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 GLS2Q9UI32 602 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 MGAT4AQ9UM21 535 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 ALG5Q9Y673 324 aa7.12□□□□□ -1.27
CHD4-208ENST00000540960 PQLC2LA1A4F0 135 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 ZNF850A8MQ14 1090 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 GPR37O15354 613 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 SSNA1O43805 119 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 RAD51DO75771 328 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 TNFSF13O75888 250 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 HTR3BO95264 441 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 AMY2AP04746 511 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 GSTT2P0CG29 244 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 ANXA3P12429 323 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 ACKR3P25106 362 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 ERP29P30040 261 aaKnown RBP7.11□□□□□ -1.27
CHD4-208ENST00000540960 SRP9P49458 86 aaKnown RBP7.11□□□□□ -1.27
CHD4-208ENST00000540960 UCP2P55851 309 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 ZP1P60852 638 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 FAM27E3Q08E93 113 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 PRDX4Q13162 271 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 UNC119Q13432 240 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 MADCAM1Q13477 382 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 RBM39Q14498 530 aaKnown RBP7.11□□□□□ -1.27
CHD4-208ENST00000540960 SURF2Q15527 256 aaPredicted RBP7.11□□□□□ -1.27
CHD4-208ENST00000540960 SRSF7Q16629 238 aaKnown RBP eCLIP7.11□□□□□ -1.272e-7■□□□□ 8.9
CHD4-208ENST00000540960 ZNF718Q3SXZ3 478 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 AWAT1Q58HT5 328 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 RNASE12Q5GAN4 147 aaKnown RBP7.11□□□□□ -1.27
CHD4-208ENST00000540960 SFRP4Q6FHJ7 346 aaPredicted RBP7.11□□□□□ -1.27
CHD4-208ENST00000540960 LIN54Q6MZP7 749 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 MED12LQ86YW9 2145 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 GCNT2Q8N0V5 402 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 DTX3Q8N9I9 347 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 OR5H2Q8NGV7 314 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 OR4K15Q8NH41 348 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 OR2AE1Q8NHA4 323 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 FGFBP3Q8TAT2 258 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 OR5P3Q8WZ94 311 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 UPRTQ96BW1 309 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 STARD4Q96DR4 205 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 Q96M66 194 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 C1orf147Q96MC9 270 aaPredicted RBP7.11□□□□□ -1.27
CHD4-208ENST00000540960 DHRS9Q9BPW9 319 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 GINS4Q9BRT9 223 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 GPR160Q9UJ42 338 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 ANAPC10Q9UM13 185 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 STARD10Q9Y365 291 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 TENM3Q9P273 2699 aa7.11□□□□□ -1.27
CHD4-208ENST00000540960 TRAV6A0A075B6T7 132 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 LRP5LA4QPB2 252 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 TMEM235A6NFC5 223 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 IQCF6A8MYZ5 107 aa7.1□□□□□ -1.27
CHD4-208ENST00000540960 FAM157AC9JC47 383 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms