RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 FAM189A2Q15884 450 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 MPV17LQ2QL34 196 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 AVPI1Q5T686 147 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 STUMQ69YW2 141 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 CNIH2Q6PI25 160 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 RTN4RL2Q86UN3 420 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 CD177Q8N6Q3 437 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 OR4M1Q8NGD0 313 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 OR56B1Q8NGI3 324 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 POM121Q96HA1 1249 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DIRAS2Q96HU8 199 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TMEM165Q9HC07 324 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 MYOZ1Q9NP98 299 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 BEX4Q9NWD9 120 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 EXTL2Q9UBQ6 330 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ZNF222Q9UK12 451 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DYSFO75923 2080 aa15.82■□□□□ 0.12
TNFRSF1A-213ENST00000540022 OR2H2O95918 312 aa15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 IGHV2-70P01814 119 aa15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 GYPAP02724 150 aa15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ZNF44P15621 663 aa15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 BLVRBP30043 206 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PRDX2P32119 198 aa15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PEG10Q86TG7 708 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 LINC00596Q86U02 117 aa15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 IZUMO1Q8IYV9 350 aa15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 OR10R2Q8NGX6 335 aa15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 METRNQ9UJH8 293 aa15.81■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ZFHX3Q15911 3703 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 SIRPB1O00241 398 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 SH2D1BO14796 132 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TNFRSF13BO14836 293 aaPredicted RBP15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DEGS1O15121 323 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FSTL3O95633 263 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PLAC9Q5JTB6 97 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 CCDC190Q86UF4 302 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 RAB1CQ92928 201 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TIMD4Q96H15 378 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TMEM246Q9BRR3 403 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DIABLOQ9NR28 239 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 GLS2Q9UI32 602 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TANC2Q9HCD6 1990 aa15.8■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TRAV24A0A0B4J272 114 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 XRCC3O43542 346 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 CHATP28329 748 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 MDH2P40926 338 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 GPR6P46095 362 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 GABRA2P47869 451 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PDLIM4P50479 330 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 COL10A1Q03692 680 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 NKAPLQ5M9Q1 402 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ATAD3CQ5T2N8 411 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 RAB12Q6IQ22 244 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 BRICD5Q6PL45 260 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 C6orf201Q7Z4U5 140 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PHF21AQ96BD5 680 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 RAB3CQ96E17 227 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ARHGAP5-AS1Q96IT6 56 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 CCL13Q99616 98 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 IFT22Q9H7X7 185 aa15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 SEBOXQ9HB31 216 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 RCC2Q9P258 522 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TRAV18A0A075B6X5 111 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 A0A0A6YYH2 397 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ISPDA4D126 451 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 A6NJ64 397 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PDCD6O75340 191 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 SCGNO76038 276 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FUT3P21217 361 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 LMO1P25800 156 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 GIFP27352 417 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TMEM69Q5SWH9 247 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ZNF788Q6ZQV5 615 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 LINC00299Q6ZSB3 139 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 Q6ZTK2 550 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 KRTAP1-3Q8IUG1 177 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 LRRC75A-AS1Q8N1F1 130 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 CHST4Q8NCG5 386 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 NEDD4LQ96PU5 975 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 NUDT16L1Q9BRJ7 211 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ZMAT3Q9HA38 289 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 KCNK7Q9Y2U2 307 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 MAB21L2Q9Y586 359 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 C2CD3Q4AC94 2353 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 A0A1B0GW55 424 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 SLC33A1O00400 549 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 HSPB6O14558 160 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 PSPNO60542 156 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DUX4L2P0CJ85 424 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DUX4L3P0CJ86 424 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DUX4L4P0CJ87 422 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DUX4L5P0CJ88 424 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DUX4L6P0CJ89 424 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DUX4L7P0CJ90 424 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 TALDO1P37837 337 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 ATPAF1Q5TC12 328 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 DUX4L9Q6RFH8 374 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 LYPD2Q6UXB3 125 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 SUMF2Q8NBJ7 301 aa15.78■□□□□ 0.12
TNFRSF1A-213ENST00000540022 FAM168AQ92567 244 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms