RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 NINQ8N4C6 2090 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 TRAV38-1A0A0B4J264 116 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 CXorf51AA0A1B0GTR3 108 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 A0A1W2PPK0 400 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 DIRC3C9JPN6 131 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 M0R1X1 148 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 CDC42EP2O14613 210 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 RAD51DO75771 328 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 S1PR2O95136 353 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 ETHE1O95571 254 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 KLF8O95600 359 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-211ENST00000539921 DDAH2O95865 285 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 EOMESO95936 686 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 NUDT3O95989 172 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 NRASP01111 189 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 KRASP01116 189 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 CLEC3BP05452 202 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF28P17035 718 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 IGFBP3P17936 291 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-211ENST00000539921 ATP6V0CP27449 155 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 HOXD9P28356 352 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-211ENST00000539921 S100GP29377 79 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 SSTR5P35346 364 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 BUD31P41223 144 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-211ENST00000539921 CDKN1CP49918 316 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-211ENST00000539921 GNG4P50150 75 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 EFNB2P52799 333 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 PPP1CBP62140 327 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 FMODQ06828 376 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 RAB30Q15771 203 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 HLA-BQ31612 363 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 ANKRD55Q3KP44 614 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 CEACAM21Q3KPI0 293 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 SPIN3Q5JUX0 258 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 STPG1Q5TH74 334 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 TMEM182Q6ZP80 229 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-211ENST00000539921 C16orf82Q7Z2V1 217 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 TRAPPC6BQ86SZ2 158 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-211ENST00000539921 OR4N5Q8IXE1 308 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF295-AS1Q8N0V1 137 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 FBXL14Q8N1E6 418 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 ZNF676Q8N7Q3 588 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 C5orf17Q8NAS9 161 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 ST6GALNAC3Q8NDV1 305 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 TSTD1Q8NFU3 115 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 OR2G3Q8NGZ4 309 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 MCHR1Q99705 422 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 PMCHL2Q9BQD1 86 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 HSPB9Q9BQS6 159 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 WFDC6Q9BQY6 131 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 RSG1Q9BU20 258 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 LINC00470Q9BZP3 86 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 LINC00597Q9H2U6 94 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 MANBALQ9NQG1 85 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 LRIT1Q9P2V4 623 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 PRSS50Q9UI38 385 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 TRAPPC2LQ9UL33 140 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 RLFQ13129 1914 aa5.36□□□□□ -1.55
SNHG1-211ENST00000539921 CCDC88CQ9P219 2028 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 MCM3APO60318 1980 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 PLXNB2O15031 1838 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 TRAV9-2A0A087WT02 112 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 A0A087WV62 115 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 BLACEA4D250 179 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 SERINC4A6NH21 518 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 PRR33A8MZF0 331 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 ALG1L2C9J202 215 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 TGFBR3LH3BV60 316 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 TMPRSS2O15393 492 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 ST8SIA3O43173 380 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 WIPF1O43516 503 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 HCRTO43612 131 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 B4GALT2O60909 372 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 NDUFB2O95178 105 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 GJB5O95377 273 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 HBZP02008 142 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 CATP04040 527 aaKnown RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 MRPL3P09001 348 aaKnown RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 FTH1P19P0C7X4 201 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 NTSP30990 170 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 S100A7P31151 101 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 HRH1P35367 487 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 GUCA1AP43080 201 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 METAP1P53582 386 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 UCP3P55916 312 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 CLDN6P56747 220 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 TAS2R30P59541 319 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 NANOS3P60323 173 aaKnown RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 DCAF7P61962 342 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 CSNK2A1P68400 391 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 HSD52Q0P140 79 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 TMEM267Q0VDI3 215 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 SRSF6Q13247 344 aaKnown RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 EIF2B1Q14232 305 aaKnown RBP5.35□□□□□ -1.55
SNHG1-211ENST00000539921 CD226Q15762 336 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 ADIRFQ15847 76 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 PCK2Q16822 640 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 TMEM249Q2WGJ8 235 aa5.35□□□□□ -1.55
SNHG1-211ENST00000539921 CD300EQ496F6 205 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms