RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 Q499Y3 187 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 ATPAF1Q5TC12 328 aaPredicted RBP12.2□□□□□ -0.46
USB1-203ENST00000539737 SLC35E4Q6ICL7 350 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 ACP7Q6ZNF0 438 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 SLC25A26Q70HW3 274 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 PRSS48Q7RTY5 328 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 ANGPTL5Q86XS5 388 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 MKXQ8IYA7 352 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 Q8IYB0 196 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 ZFP41Q8N8Y5 198 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 ANGPTL6Q8NI99 470 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 TMEM106AQ96A25 262 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 CEP19Q96LK0 163 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 C16orf95Q9H693 158 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 HES4Q9HCC6 221 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 SNTG1Q9NSN8 517 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 LSM2Q9Y333 95 aaKnown RBP12.2□□□□□ -0.46
USB1-203ENST00000539737 TRBV5-5A0A0J9YX44 114 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 RNASEK-C17orf49H0YIS7 233 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 MAGEB3O15480 346 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 CELP19835 753 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 GABARAPL2P60520 117 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 MED22Q15528 200 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 ZNF788Q6ZQV5 615 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 OR5T2Q8NGG2 359 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 MRAPQ8TCY5 172 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 SGCDQ92629 289 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 ZNF488Q96MN9 340 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 CCDC90BQ9GZT6 254 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 DPAGT1Q9H3H5 408 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 ZNRD1Q9P1U0 126 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 CKLFQ9UBR5 152 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 VPREB3Q9UKI3 123 aa12.19□□□□□ -0.46
USB1-203ENST00000539737 PNMA8CA0A1B0GUJ8 204 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 A0A1W2PQ09 198 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 MEGF11A6BM72 1044 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 SIGLEC5O15389 551 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 PSG2P11465 335 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 NDUFB7P17568 137 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 AMY2BP19961 511 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 MAPK3P27361 379 aaPredicted RBP12.18□□□□□ -0.46
USB1-203ENST00000539737 GABRA2P47869 451 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 RPL15P61313 204 aaKnown RBP12.18□□□□□ -0.46
USB1-203ENST00000539737 ERVK11-1P61568 191 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 TBCEQ15813 527 aaPredicted RBP12.18□□□□□ -0.46
USB1-203ENST00000539737 ZNF529Q6P280 563 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 GDPGP1Q6ZNW5 385 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 Q8N7P7 452 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 OR13C5Q8NGS8 318 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 UFD1Q92890 307 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 SLAMF9Q96A28 289 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 GAFA1Q96PS6 74 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 DCTN5Q9BTE1 182 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 TAS2R4Q9NYW5 299 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 SLC25A10Q9UBX3 287 aaPredicted RBP12.18□□□□□ -0.46
USB1-203ENST00000539737 ZNF222Q9UK12 451 aa12.18□□□□□ -0.46
USB1-203ENST00000539737 IGKV1D-17A0A075B6S4 117 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 MRPS14O60783 128 aaKnown RBP12.17□□□□□ -0.46
USB1-203ENST00000539737 TSPAN9O75954 239 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 PAHP00439 452 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 FBP1P09467 338 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 FSTP19883 344 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 CAPZA1P52907 286 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 RPS11P62280 158 aaKnown RBP eCLIP12.17□□□□□ -0.46
USB1-203ENST00000539737 PDZK1IP1Q13113 114 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 KISS1Q15726 138 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 KPRPQ5T749 579 aaPredicted RBP12.17□□□□□ -0.46
USB1-203ENST00000539737 C11orf87Q6NUJ2 197 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 SAXO1Q8IYX7 474 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 MS4A15Q8N5U1 240 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 EMG1Q92979 244 aaKnown RBP12.17□□□□□ -0.46
USB1-203ENST00000539737 RFT1Q96AA3 541 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 SDSLQ96GA7 329 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 OR14A2Q96R54 314 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 OR5M11Q96RB7 305 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 YTHDF1Q9BYJ9 559 aaKnown RBP12.17□□□□□ -0.46
USB1-203ENST00000539737 RHOFQ9HBH0 211 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 ISYNA1Q9NPH2 558 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 TMEM138Q9NPI0 162 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 MTCH1Q9NZJ7 389 aa12.17□□□□□ -0.46
USB1-203ENST00000539737 COL7A1Q02388 2944 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 A0A1W2PPH5 198 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 RFPL4AA6NLU0 287 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 RFPL4AL1F8VTS6 287 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 NPFFO15130 113 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 OPN1MWP04001 364 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 OPN1MW2P0DN77 364 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 OPN1MW3P0DN78 364 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 VSIG8P0DPA2 414 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 GABRA5P31644 462 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 CAV3P56539 151 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 GPR50Q13585 617 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 DOC2BQ14184 412 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 NCR3LG1Q68D85 454 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 ZNF367Q7RTV3 350 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 BATF2Q8N1L9 274 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 ZNF561Q8N587 486 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 LY6G5BQ8NDX9 201 aa12.16□□□□□ -0.46
USB1-203ENST00000539737 TMEM185AQ8NFB2 350 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms