RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 C14orf79Q96F83 325 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 CYYR1Q96J86 154 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 TMUB1Q9BVT8 246 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 PECRQ9BY49 303 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 AUNIPQ9H7T9 357 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 PLEKHJ1Q9NW61 149 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 RASL12Q9NYN1 266 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 WIPI2Q9Y4P8 454 aa11.88□□□□□ -0.51
CD4-208ENST00000538827 MEIS3P1A6NDR6 274 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A10PA6NDY2 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A18PA6NE21 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A16PA6NEW6 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 OOEPA6NGQ2 149 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A20PA6NIJ5 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 NKX6-3A6NJ46 265 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A8PA6NJQ4 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A7PA6NKC0 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A22PA8MWA6 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A12PA8MX19 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A5PA8MXJ8 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A23PA8MXZ1 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 TMEM178BH3BS89 294 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.87□□□□□ -0.51
CD4-208ENST00000538827 IFNL4K9M1U5 179 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 SH2D1BO14796 132 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 DEGS1O15121 323 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A15PP0C7V4 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A13PP0C7W8 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A14PP0C7W9 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM90A24PP0C7X0 464 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 DAOP14920 347 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 PTBP1P26599 531 aaKnown RBP eCLIP11.87□□□□□ -0.51
CD4-208ENST00000538827 CHATP28329 748 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 CFHR2P36980 270 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 GABRA2P47869 451 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 GNG2P59768 71 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 DGCR2P98153 550 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 GUCA2AQ02747 115 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 ARFRP1Q13795 201 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 ZNF181Q2M3W8 571 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 CDNFQ49AH0 187 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 PLAC9Q5JTB6 97 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 BRICD5Q6PL45 260 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 C6orf201Q7Z4U5 140 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 FAM89BQ8N5H3 189 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 NUDCD2Q8WVJ2 157 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 DYRK2Q92630 601 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 NRGNQ92686 78 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 RDH5Q92781 318 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 BORCS5Q969J3 196 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 NUDT16L1Q9BRJ7 211 aaKnown RBP11.87□□□□□ -0.51
CD4-208ENST00000538827 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 ABCB10Q9NRK6 738 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 RABL2AQ9UBK7 228 aaPredicted RBP11.87□□□□□ -0.51
CD4-208ENST00000538827 ELF5Q9UKW6 265 aaPredicted RBP11.87□□□□□ -0.51
CD4-208ENST00000538827 RABL2BQ9UNT1 228 aa11.87□□□□□ -0.51
CD4-208ENST00000538827 PPIAL4EA0A075B759 164 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 UBE2QL1A1L167 161 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 ISPDA4D126 451 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 RFPL4AA6NLU0 287 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 OR2AT4A6NND4 320 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 FOXI3A8MTJ6 420 aaPredicted RBP11.86□□□□□ -0.51
CD4-208ENST00000538827 PPIAL4DF5H284 164 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 RFPL4AL1F8VTS6 287 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 LGALS8O00214 317 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 MFNGO00587 321 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 OR2H2O95918 312 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 HLA-DQB1P01920 261 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 GSTP1P09211 210 aaKnown RBP11.86□□□□□ -0.51
CD4-208ENST00000538827 PPIAL4FP0DN26 164 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 COL8A2P25067 703 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 INPP1P49441 399 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 PPP5CP53041 499 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 TMEM50BP56557 158 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 MRPS15P82914 257 aaKnown RBP11.86□□□□□ -0.51
CD4-208ENST00000538827 ZNF260Q3ZCT1 412 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 PAN3Q58A45 887 aaKnown RBP11.86□□□□□ -0.51
CD4-208ENST00000538827 TRIQKQ629K1 86 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 OLFML2AQ68BL7 652 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 SIGIRRQ6IA17 410 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 C16orf87Q6PH81 154 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 Q8N402 240 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 GDPD1Q8N9F7 314 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 ASCC1Q8N9N2 400 aaKnown RBP11.86□□□□□ -0.51
CD4-208ENST00000538827 C15orf40Q8WUR7 153 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 SOSTQ9BQB4 213 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 SULT4A1Q9BR01 284 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 CHMP1AQ9HD42 196 aaPredicted RBP11.86□□□□□ -0.51
CD4-208ENST00000538827 PPIAL4AQ9Y536 164 aa11.86□□□□□ -0.51
CD4-208ENST00000538827 NDUFS7O75251 213 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 LHBP01229 141 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 GYPAP02724 150 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 FCER2P06734 321 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 CD3GP09693 182 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 PSG2P11465 335 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 FUT3P21217 361 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 PRSS3P35030 304 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 COL10A1Q03692 680 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 ARL6IP1Q15041 203 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms