RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ZNF91Q05481 1191 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 UBE2V2Q15819 145 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 KLHL22Q53GT1 634 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 OR52W1Q6IF63 320 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 RTN4RL2Q86UN3 420 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 HS3ST5Q8IZT8 346 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 P2RX4Q99571 388 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 THTPAQ9BU02 230 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 TEX12Q9BXU0 123 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 TVP23BQ9NYZ1 205 aa11.08□□□□□ -0.64
SMARCA4-206ENST00000538456 BIRC6Q9NR09 4857 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 DHRS7CA6NNS2 312 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 BUB1B-PAK6H3BSN5 160 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 GNGT2O14610 69 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 TOR1AO14656 332 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 RPP14O95059 124 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 SNRNP70P08621 437 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 RAP2AP10114 183 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 PRKACAP17612 351 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 BCL3P20749 454 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 PRKACGP22612 351 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 MNDAP41218 407 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 NPBWR2P48146 333 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 HLA-DRB5Q30154 266 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 UTF1Q5T230 341 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 HEPN1Q6WQI6 88 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 ENTHD1Q8IYW4 607 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 CHPT1Q8WUD6 406 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 BORCS8Q96FH0 119 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 ING3Q9NXR8 418 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 GLS2Q9UI32 602 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 LSM4Q9Y4Z0 139 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 SNX5Q9Y5X3 404 aa11.07□□□□□ -0.64
SMARCA4-206ENST00000538456 DNAH7Q8WXX0 4024 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 SERPINE3A8MV23 424 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 M0R129 80 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 RAMP3O60896 148 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 E2F6O75461 281 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 FAM106CPP0CH98 169 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 CCL1P22362 96 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 GLIPR1P48060 266 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 POU3F4P49335 361 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 FUT6P51993 359 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 MS4A2Q01362 244 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 AESQ08117 197 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 GK3PQ14409 553 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 HES1Q14469 280 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 KPNB1Q14974 876 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 CCDC144NLQ6NUI1 221 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 BCDIN3DQ7Z5W3 292 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 ZNF695Q8IW36 515 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 SLC35F2Q8IXU6 374 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 Q8IYB0 196 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 FAM58AQ8N1B3 248 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 OR56B4Q8NH76 319 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 CREB3L1Q96BA8 519 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 RAX2Q96IS3 184 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 SLC25A19Q9HC21 320 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 ZFP57Q9NU63 452 aa11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 MRM2Q9UI43 246 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-206ENST00000538456 TRBV2A0A0J9YWF9 115 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 LY6LH3BQJ8 138 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 CCL24O00175 119 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 SYT7O43581 403 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 ENTPD6O75354 484 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 CIB2O75838 187 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 GATBO75879 557 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 NFYBP25208 207 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 CD34P28906 385 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 ERP29P30040 261 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 SLC6A1P30531 599 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 ECI1P42126 302 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 ACTR3P61158 418 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 TRIM25Q14258 630 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 DEFB136Q30KP8 78 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 Q6ZSR3 168 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 C5orf56Q8N8D9 126 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 TOMM40LQ969M1 308 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 RPEQ96AT9 228 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 CCDC124Q96CT7 223 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 CHST5Q9GZS9 411 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 GAR1Q9NY12 217 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 GSTK1Q9Y2Q3 226 aa11.05□□□□□ -0.64
SMARCA4-206ENST00000538456 ZNF670-ZNF695F2Z2N8 137 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 PRKYO43930 277 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 ZFPL1O95159 310 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 OR2H2O95918 312 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 CYB5AP00167 134 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 TMEM11P17152 192 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 PTGFRP43088 359 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 PRRX1P54821 245 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 SLC35B1P78383 322 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 SCN1BQ07699 218 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 HNF4GQ14541 408 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 ZNF146Q15072 292 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 SPIN3Q5JUX0 258 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 SSX6Q7RTT6 188 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 DRAM1Q8N682 238 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 YIPF7Q8N8F6 280 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms