RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 CCKARP32238 428 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 CFHR2P36980 270 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ID1P41134 155 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 CRYBB2P43320 205 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 TMBIM6P55061 237 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ERVS71-1P61550 626 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 FMODQ06828 376 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 MLLT11Q13015 90 aaPredicted RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 GK2Q14410 553 aaPredicted RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ALKBH6Q3KRA9 238 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 LRRC10Q5BKY1 277 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 FAM219BQ5XKK7 198 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 LINC00299Q6ZSB3 139 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 IQCF1Q8N6M8 205 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 TMEM104Q8NE00 496 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 KLF14Q8TD94 323 aaPredicted RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 CCDC107Q8WV48 283 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 GLMPQ8WWB7 406 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 GPER1Q99527 375 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 BEX2Q9BXY8 128 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 REG4Q9BYZ8 158 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 FAM234AQ9H0X4 552 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 VCX2Q9H322 139 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 TMEM138Q9NPI0 162 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PTTG3PQ9NZH4 202 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 DNAJC27Q9NZQ0 273 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PPP1R3CQ9UQK1 317 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 TBL2Q9Y4P3 447 aaKnown RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 LHFPL6Q9Y693 200 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PCSK5Q92824 1860 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 TRBV2A0A0J9YWF9 115 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 SHISA9B4DS77 424 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 E7EQL1 145 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 H7C1C5 153 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 J3QLW9 94 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 TGOLN2O43493 480 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ENTPD6O75354 484 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 NRASP01111 189 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ZNF19P17023 458 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ATF1P18846 271 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 CCL1P22362 96 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 USF1P22415 310 aaPredicted RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 FPR2P25090 351 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 GLP1RP43220 463 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ZNF121P58317 390 aaPredicted RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 LCN6P62502 163 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PMS2P11Q13670 270 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 CLINT1Q14677 625 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 OR8B8Q15620 311 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 CLEC12BQ2HXU8 276 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 KRTAP27-1Q3LI81 207 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 RNASE10Q5GAN6 216 aaKnown RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 LINC01590Q5TEZ4 76 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PLCXD3Q63HM9 321 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PET117Q6UWS5 81 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 BPIFB6Q8NFQ5 453 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 SLC7A6Q92536 515 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 NEIL1Q96FI4 390 aaPredicted RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 SIGLEC11Q96RL6 698 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 SLC30A2Q9BRI3 323 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PLA2G12AQ9BZM1 189 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 VNN3Q9NY84 501 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 MTCH1Q9NZJ7 389 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PSORS1C1Q9UIG5 152 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 LAMP3Q9UQV4 416 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PPIAL4AQ9Y536 164 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 NINQ8N4C6 2090 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 CCDC88CQ9P219 2028 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 FABP12A6NFH5 140 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 B4DSR2 109 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 EREGO14944 169 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 NDUFB3O43676 98 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ENSAO43768 121 aaKnown RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 CHRM2P08172 466 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ADRA2AP08913 450 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 DANCRP0C864 163 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 DAOP14920 347 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 GADD45AP24522 165 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 IL3RAP26951 378 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 S100A11P31949 105 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 MTNR1BP49286 362 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 RAB2AP61019 212 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 HERV-K104P63124 156 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 GUCA2AQ02747 115 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 IL13RA2Q14627 380 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 SPHARQ15513 63 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 Q499Y3 187 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 SPIN3Q5JUX0 258 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 OR52W1Q6IF63 320 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 MYPOPQ86VE0 399 aaPredicted RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 CALHM1Q8IU99 346 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 TGIF2LYQ8IUE0 185 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 BOD1L2Q8IYS8 172 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 RDH10Q8IZV5 341 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 LGALS12Q96DT0 336 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 DAZAP1Q96EP5 407 aaKnown RBP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 PLEKHF2Q9H8W4 249 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ADGRL4Q9HBW9 690 aa3.06□□□□□ -1.92
PTPN22-211ENST00000538253 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.06□□□□□ -1.92
PTPN22-211ENST00000538253 ERVK13-1Q9NX77 482 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms