RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 GSKIPQ9P0R6 139 aa13.42□□□□□ -0.26
MKS1-204ENST00000537529 LHX6Q9UPM6 363 aa13.42□□□□□ -0.26
MKS1-204ENST00000537529 ARHGAP21Q5T5U3 1957 aa13.42□□□□□ -0.26
MKS1-204ENST00000537529 F8VVB4 439 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 F8VWA3 439 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 SYNGR1O43759 233 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 PRKACAP17612 351 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 IL15RAQ13261 267 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 RAB32Q13637 225 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 IAH1Q2TAA2 248 aaPredicted RBP13.41□□□□□ -0.26
MKS1-204ENST00000537529 DEFB109BQ30KR1 87 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 OR2T2Q6IF00 324 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 FBXW12Q6X9E4 464 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 Q6ZPA2 131 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 GCNT2Q8N0V5 402 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 CCDC71LQ8N9Z2 235 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 RELL2Q8NC24 303 aaPredicted RBP13.41□□□□□ -0.26
MKS1-204ENST00000537529 RTN4IP1Q8WWV3 396 aaPredicted RBP13.41□□□□□ -0.26
MKS1-204ENST00000537529 SARAFQ96BY9 339 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 GALNT14Q96FL9 552 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 SYT3Q9BQG1 590 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 SUCNR1Q9BXA5 334 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 DNAJB11Q9UBS4 358 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 FREM1Q5H8C1 2179 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 LILRA1O75019 489 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 ZNF250P15622 560 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 S100A10P60903 97 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 IL24Q13007 206 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 GUSBP1Q15486 140 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 SPATA46Q5T0L3 261 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 Q6ZT83 130 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 STOML3Q8TAV4 291 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 NEK7Q8TDX7 302 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 RRNAD1Q96FB5 475 aaKnown RBP13.41□□□□□ -0.26
MKS1-204ENST00000537529 Q9N2K0 584 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 OR5AC2Q9NZP5 309 aa13.41□□□□□ -0.26
MKS1-204ENST00000537529 ZNF205O95201 554 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 CNOT4O95628 575 aaKnown RBP13.4□□□□□ -0.26
MKS1-204ENST00000537529 NAPSAO96009 420 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 AADACP22760 399 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 CA6P23280 308 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 IL32P24001 234 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 PPP1CBP62140 327 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 IL13RA2Q14627 380 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 AQP10Q96PS8 301 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 HS3ST6Q96QI5 342 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 RSRP1Q9BUV0 290 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 RTL8AQ9BWD3 113 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 SLC2A9Q9NRM0 540 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 PLSCR2Q9NRY7 297 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 IL36RNQ9UBH0 155 aa13.4□□□□□ -0.26
MKS1-204ENST00000537529 J3QT63 122 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 KCNAB3O43448 404 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 SMPD2O60906 423 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 LYZL6O75951 148 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 OR5AC1P0C628 307 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 TPT1P13693 172 aaKnown RBP13.4□□□□□ -0.27
MKS1-204ENST00000537529 HOXB1P14653 301 aaPredicted RBP13.4□□□□□ -0.27
MKS1-204ENST00000537529 ZP3P21754 424 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 IDH3GP51553 393 aaPredicted RBP13.4□□□□□ -0.27
MKS1-204ENST00000537529 NAAAQ02083 359 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 SNTB1Q13884 538 aaKnown RBP13.4□□□□□ -0.27
MKS1-204ENST00000537529 TMEM187Q14656 261 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 PHLDA2Q53GA4 152 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 FAM74A1Q5RGS3 127 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 GGNBP1Q5YKI7 109 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 INO80CQ6PI98 192 aaPredicted RBP13.4□□□□□ -0.27
MKS1-204ENST00000537529 HSD17B13Q7Z5P4 300 aaPredicted RBP13.4□□□□□ -0.27
MKS1-204ENST00000537529 OR5T2Q8NGG2 359 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 DMRTA2Q96SC8 542 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 RIMS4Q9H426 269 aaPredicted RBP13.4□□□□□ -0.27
MKS1-204ENST00000537529 RHOFQ9HBH0 211 aa13.4□□□□□ -0.27
MKS1-204ENST00000537529 KIR2DS1A0A191URI9 304 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 CEACAM4O75871 244 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 DIRAS3O95661 229 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 CRYZL1O95825 349 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 PPYP01298 95 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 CELA3BP08861 270 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 KIR2DS4P43632 304 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 SMCO1Q147U7 214 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 KIR2DS1Q14954 304 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 GABRA6Q16445 453 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 PAN3Q58A45 887 aaKnown RBP13.39□□□□□ -0.27
MKS1-204ENST00000537529 UNQ6126/PRO20091Q6UXV3 157 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 FAM58AQ8N1B3 248 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 CNEP1R1Q8N9A8 125 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 GTF3AQ92664 365 aaKnown RBP13.39□□□□□ -0.27
MKS1-204ENST00000537529 WNT2BQ93097 391 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 MRPL24Q96A35 216 aaKnown RBP13.39□□□□□ -0.27
MKS1-204ENST00000537529 SHARPINQ9H0F6 387 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 OR51I2Q9H344 312 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 TUBD1Q9UJT1 453 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 DNAJC13O75165 2243 aa13.39□□□□□ -0.27
MKS1-204ENST00000537529 PRR33A8MZF0 331 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 TK1P04183 234 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 GLAP06280 429 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 HOXC12P31275 282 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 IGSF11Q5DX21 431 aa13.38□□□□□ -0.27
MKS1-204ENST00000537529 MYPOPQ86VE0 399 aaPredicted RBP13.38□□□□□ -0.27
MKS1-204ENST00000537529 FAM185AQ8N0U4 392 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms