RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 GADD45AP24522 165 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 DUSP1P28562 367 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 RPL5P46777 297 aaKnown RBP14.79□□□□□ -0.04
CCDC61-201ENST00000536603 ZP1P60852 638 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 ACSM3Q53FZ2 586 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 CD200R1LQ6Q8B3 271 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 FIP1L1Q6UN15 594 aaKnown RBP14.79□□□□□ -0.04
CCDC61-201ENST00000536603 SAXO1Q8IYX7 474 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 MS4A15Q8N5U1 240 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 ASCC1Q8N9N2 400 aaKnown RBP14.79□□□□□ -0.04
CCDC61-201ENST00000536603 C8orf46Q8TAG6 207 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 CPNE2Q96FN4 548 aaPredicted RBP14.79□□□□□ -0.04
CCDC61-201ENST00000536603 DERL3Q96Q80 235 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 TBX15Q96SF7 602 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 NKX3-1Q99801 234 aaPredicted RBP14.79□□□□□ -0.04
CCDC61-201ENST00000536603 ZNF747Q9BV97 191 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 SIRPDQ9H106 197 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 HMG20AQ9NP66 347 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 TMEM138Q9NPI0 162 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 ZNF69Q9UC07 566 aa14.79□□□□□ -0.04
CCDC61-201ENST00000536603 MEGF8Q7Z7M0 2845 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 A0A1W2PQ09 198 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 GABRPO00591 440 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 HAND1O96004 215 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 TK1P04183 234 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 ALDOBP05062 364 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 IGFBP3P17936 291 aaPredicted RBP14.78□□□□□ -0.04
CCDC61-201ENST00000536603 PRR31Q5SQ13 230 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 CEACAM19Q7Z692 300 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 BCL6BQ8N143 479 aaPredicted RBP14.78□□□□□ -0.04
CCDC61-201ENST00000536603 ZSCAN4Q8NAM6 433 aaPredicted RBP14.78□□□□□ -0.04
CCDC61-201ENST00000536603 DMRTB1Q96MA1 342 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 MS4A7Q9GZW8 240 aaPredicted RBP14.78□□□□□ -0.04
CCDC61-201ENST00000536603 NOX4Q9NPH5 578 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 CKLFQ9UBR5 152 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 GSTK1Q9Y2Q3 226 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 KPTNQ9Y664 436 aa14.78□□□□□ -0.04
CCDC61-201ENST00000536603 TRAV8-7A0A075B6U6 113 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 TRBV23-1A0A0A0MS06 115 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 K7N7A8 449 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 BDKRB2P30411 391 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 ZNF146Q15072 292 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 DDI2Q5TDH0 399 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 GPR157Q5UAW9 335 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 CMTM4Q8IZR5 234 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 FAM185AQ8N0U4 392 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 OR4M1Q8NGD0 313 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 TNFAIP8L1Q8WVP5 186 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 FUNDC2Q9BWH2 189 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 NAA50Q9GZZ1 169 aaKnown RBP14.77□□□□□ -0.05
CCDC61-201ENST00000536603 FAM234AQ9H0X4 552 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 RNF167Q9H6Y7 350 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 RHOFQ9HBH0 211 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 C19orf12Q9NSK7 152 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 GLS2Q9UI32 602 aa14.77□□□□□ -0.05
CCDC61-201ENST00000536603 SOX21Q9Y651 276 aaPredicted RBP14.77□□□□□ -0.05
CCDC61-201ENST00000536603 TRDV1A0A1B0GX56 115 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 TMEM82A0PJX8 343 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 ZNF737O75373 536 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 HKR1P10072 659 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 ZNF93P35789 620 aaPredicted RBP14.76□□□□□ -0.05
CCDC61-201ENST00000536603 RPL31P62899 125 aaKnown RBP14.76□□□□□ -0.05
CCDC61-201ENST00000536603 BLMHQ13867 455 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 PDCD1Q15116 288 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 TRAM1Q15629 374 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 SPIN3Q5JUX0 258 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 BRD3OSQ6XYD6 125 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 SLC16A12Q6ZSM3 486 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 VMO1Q7Z5L0 202 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 SIGLECL1Q8N7X8 197 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 PXT1Q8NFP0 134 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 LHX4Q969G2 390 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 SNX22Q96L94 193 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 DUX5Q96PT3 197 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 FAM192AQ9GZU8 254 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 SEBOXQ9HB31 216 aaPredicted RBP14.76□□□□□ -0.05
CCDC61-201ENST00000536603 STUB1Q9UNE7 303 aa14.76□□□□□ -0.05
CCDC61-201ENST00000536603 CENPVL3A0A0U1RRI6 287 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 SHISA3A0PJX4 238 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 SH2D1BO14796 132 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 MAS1P04201 325 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 UCHL1P09936 223 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 FSTP19883 344 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 GABRR1P24046 479 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 PSMA1P25786 263 aaKnown RBP14.75□□□□□ -0.05
CCDC61-201ENST00000536603 PTGFRP43088 359 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 OR3A4PP47883 348 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 C17orf107Q6ZR85 190 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 GPR141Q7Z602 305 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 PDZD9Q8IXQ8 264 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 KIR3DL3Q8N743 410 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 Q8N7P7 452 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 CHCHD6Q9BRQ6 235 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 CENPOQ9BU64 300 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 EXOSC4Q9NPD3 245 aaKnown RBP14.75□□□□□ -0.05
CCDC61-201ENST00000536603 SIRT7Q9NRC8 400 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 TXNL4BQ9NX01 149 aaKnown RBP14.75□□□□□ -0.05
CCDC61-201ENST00000536603 ING4Q9UNL4 249 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 FOXJ3Q9UPW0 622 aa14.75□□□□□ -0.05
CCDC61-201ENST00000536603 M0R1W7 72 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms