RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 C12orf54Q6X4T0 127 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 ZNF782Q6ZMW2 699 aaPredicted RBP10.74□□□□□ -0.69
PRKDC-206ENST00000536429 GDPD3Q7L5L3 318 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 SAXO1Q8IYX7 474 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 ZSCAN4Q8NAM6 433 aaPredicted RBP10.74□□□□□ -0.69
PRKDC-206ENST00000536429 OR10K1Q8NGX5 313 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 TNFAIP8L1Q8WVP5 186 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 SLC25A28Q96A46 364 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 OR5M11Q96RB7 305 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 SEBOXQ9HB31 216 aaPredicted RBP10.74□□□□□ -0.69
PRKDC-206ENST00000536429 EXOSC4Q9NPD3 245 aaKnown RBP10.74□□□□□ -0.69
PRKDC-206ENST00000536429 ZNF581Q9P0T4 197 aa10.74□□□□□ -0.69
PRKDC-206ENST00000536429 TRBV5-7A0A0A0MS05 114 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 MEIOCA2RUB1 952 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 C17orf98A8MV24 154 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 PIN1P1O15428 100 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 CD2P06729 351 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 CELP19835 753 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 EEF1B2P24534 225 aaKnown RBP10.73□□□□□ -0.69
PRKDC-206ENST00000536429 BMXP51813 675 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 GUCA2AQ02747 115 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 SCN1BQ07699 218 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 INSL4Q14641 139 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 Q499Y3 187 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 AWAT1Q58HT5 328 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 YIF1BQ5BJH7 314 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 SPIN3Q5JUX0 258 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 DDI2Q5TDH0 399 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 NCR3LG1Q68D85 454 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
PRKDC-206ENST00000536429 LDLRAD3Q86YD5 345 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 OR5D13Q8NGL4 314 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 OR14A2Q96R54 314 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 GPER1Q99527 375 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 ANKRD60Q9BZ19 345 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 FAM192AQ9GZU8 254 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 ZMAT3Q9HA38 289 aaKnown RBP10.73□□□□□ -0.69
PRKDC-206ENST00000536429 LSM2Q9Y333 95 aaKnown RBP10.73□□□□□ -0.69
PRKDC-206ENST00000536429 FBN3Q75N90 2809 aa10.73□□□□□ -0.69
PRKDC-206ENST00000536429 A0A0G2JK05 382 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 FAM181BA6NEQ2 426 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 H0YHG0 523 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 SLC33A1O00400 549 aaPredicted RBP10.72□□□□□ -0.69
PRKDC-206ENST00000536429 SH2D1BO14796 132 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 CDRT1O95170 752 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 ATP6V1G2O95670 118 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 ALDOBP05062 364 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 ZNF728P0DKX0 622 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 ZNF44P15621 663 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 OMGP23515 440 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 CFPP27918 469 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 BDKRB2P30411 391 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 IER3P46695 156 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 TAS2R43P59537 309 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 PPP3R1P63098 170 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 SLC35A2P78381 396 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 RELBQ01201 579 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 IRF3Q14653 427 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 TAF9Q16594 264 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 PIGYQ3MUY2 71 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 PXT1Q8NFP0 134 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 SSMEM1Q8WWF3 244 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 NR1H4Q96RI1 486 aaPredicted RBP10.72□□□□□ -0.69
PRKDC-206ENST00000536429 CDCA4Q9BXL8 241 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 PPA2Q9H2U2 334 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 TMEM138Q9NPI0 162 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 ING3Q9NXR8 418 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 ZNRD1Q9P1U0 126 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 ERGIC3Q9Y282 383 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 SF3B6Q9Y3B4 125 aaKnown RBP10.72□□□□□ -0.69
PRKDC-206ENST00000536429 FAM96BQ9Y3D0 163 aa10.72□□□□□ -0.69
PRKDC-206ENST00000536429 A0A1W2PPH5 198 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 HSPB6O14558 160 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 MGST3O14880 152 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 MAGEB3O15480 346 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 MMP23AO75900 390 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 FBP1P09467 338 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 LMO1P25800 156 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 ZNF93P35789 620 aaPredicted RBP10.71□□□□□ -0.69
PRKDC-206ENST00000536429 PTGFRP43088 359 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 MTNR1BP49286 362 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 P2RX3P56373 397 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 AESQ08117 197 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 RIPK1Q13546 671 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 LDLRAD2Q5SZI1 272 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 RNLSQ5VYX0 342 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 ELP2Q6IA86 826 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 BAIAP2L2Q6UXY1 529 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 ASCL4Q6XD76 172 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 LHFPL4Q7Z7J7 247 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 TMEM86BQ8N661 226 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 TBC1D15Q8TC07 691 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 COQ2Q96H96 371 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 ZNF714Q96N38 554 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 DERL3Q96Q80 235 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 ZNF184Q99676 751 aaPredicted RBP10.71□□□□□ -0.69
PRKDC-206ENST00000536429 DUSP21Q9H596 190 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 GLS2Q9UI32 602 aa10.71□□□□□ -0.69
PRKDC-206ENST00000536429 TRAV24A0A0B4J272 114 aa10.7□□□□□ -0.7
PRKDC-206ENST00000536429 A0A1W2PP11 408 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms