RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PTGFRP43088 359 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PRRX1P54821 245 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 CDC42P60953 191 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 EGFEM1PQ0D2K5 195 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 FLOT2Q14254 428 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 UBE2V2Q15819 145 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 NXNL2Q5VZ03 156 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 OR52N4Q8NGI2 321 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 PP6455Q8WZ26 134 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 ADGRL4Q9HBW9 690 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 IL36RNQ9UBH0 155 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 MRM2Q9UI43 246 aaKnown RBP10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 GSTK1Q9Y2Q3 226 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 MOB4Q9Y3A3 225 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 AMMECR1Q9Y4X0 333 aaPredicted RBP10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 HSPE1-MOB4S4R3N1 261 aa10.34□□□□□ -0.75
TNFRSF1A-207ENST00000535958 IGKV1-27A0A075B6S5 117 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 PSPNO60542 156 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 MMP23AO75900 390 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 CCDC159P0C7I6 412 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 UBCP0CG48 685 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ZNF44P15621 663 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ZNF20P17024 532 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 BCL3P20749 454 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ATP6V1E1P36543 226 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 OR3A1P47881 315 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 OR3A4PP47883 348 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 MTCP1P56278 107 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 SLC35B1P78383 322 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 BNIP1Q12981 228 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 HES1Q14469 280 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 PTGES3Q15185 160 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 HLA-DRB5Q30154 266 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 TPTE2P1Q5T6R2 138 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 C10orf99Q6UWK7 81 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 HEPN1Q6WQI6 88 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 LHFPL2Q6ZUX7 228 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 BCDIN3DQ7Z5W3 292 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 CATSPERDQ86XM0 798 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 MRPL41Q8IXM3 137 aaKnown RBP10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 TCEANCQ8N8B7 351 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 TMEM163Q8TC26 289 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 TOMM40LQ969M1 308 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 RPEQ96AT9 228 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 C10orf35Q96D05 121 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 THTPAQ9BU02 230 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 SEBOXQ9HB31 216 aaPredicted RBP10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 NEK6Q9HC98 313 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 PCDHB16Q9NRJ7 776 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ING3Q9NXR8 418 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 TAS2R3Q9NYW6 316 aa10.33□□□□□ -0.76
TNFRSF1A-207ENST00000535958 LOC107986453A0A1B0GWG9 222 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 METTL15A6NJ78 407 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 OOSP1A8MZH6 123 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 M0R129 80 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 FKBP6O75344 327 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ENTPD6O75354 484 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 CALCBP10092 127 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 PRKACBP22694 351 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 SLC6A1P30531 599 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 NPBWR2P48146 333 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 RAB25P57735 213 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 RPL23AP62750 156 aaKnown RBP10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ZNF146Q15072 292 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 Q6ZSR3 168 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 RNF144BQ7Z419 303 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 KLHL30-AS1Q8NEE0 82 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 DNAAF1Q8NEP3 725 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 OR10H4Q8NGA5 316 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 CHPT1Q8WUD6 406 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 NRBF2Q96F24 287 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ZNF286AQ9HBT8 521 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ENOPH1Q9UHY7 261 aa10.32□□□□□ -0.76
TNFRSF1A-207ENST00000535958 SERPINE3A8MV23 424 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 BUB1B-PAK6H3BSN5 160 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ATP8B1O43520 1251 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 OR2H2O95918 312 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 NFYBP25208 207 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 LMO1P25800 156 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 THBS3P49746 956 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 GP2P55259 537 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 DGCR2P98153 550 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 SCN1BQ07699 218 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 AESQ08117 197 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 KLHL22Q53GT1 634 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 KRBOX4Q5JUW0 171 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 BAIAP2L2Q6UXY1 529 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 C8orf86Q6ZUL3 223 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ZNF329Q86UD4 541 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 FOXRED2Q8IWF2 684 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 IL4I1Q96RQ9 567 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 WARS2Q9UGM6 360 aaKnown RBP10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 GNG8Q9UK08 70 aa10.31□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ODAMA1E959 279 aa10.3□□□□□ -0.76
TNFRSF1A-207ENST00000535958 ZNF729A6NN14 1252 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF1A-207ENST00000535958 SULT1C4O75897 302 aa10.3□□□□□ -0.76
TNFRSF1A-207ENST00000535958 IGLV1-47P01700 117 aa10.3□□□□□ -0.76
TNFRSF1A-207ENST00000535958 OR2T7P0C7T2 308 aa10.3□□□□□ -0.76
TNFRSF1A-207ENST00000535958 NHLRC4P0CG21 123 aaPredicted RBP10.3□□□□□ -0.76
TNFRSF1A-207ENST00000535958 TMEM11P17152 192 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms