RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ZCCHC10Q8TBK6 192 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 ZNRF4Q8WWF5 429 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 TAAR8Q969N4 342 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 ACY3Q96HD9 319 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 ABHD14BQ96IU4 210 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 FAM210BQ96KR6 192 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 BMFQ96LC9 184 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 YPEL4Q96NS1 127 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 DGAT2Q96PD7 388 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 TSPAN32Q96QS1 320 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 OR2M4Q96R27 311 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 LPAR4Q99677 370 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 SPIN2AQ99865 258 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 SPIN2BQ9BPZ2 258 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 MACROD1Q9BQ69 325 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 MRPL37Q9BZE1 423 aaKnown RBP5.73□□□□□ -1.49
USP28-202ENST00000535607 TCEAL2Q9H3H9 227 aaPredicted RBP5.73□□□□□ -1.49
USP28-202ENST00000535607 C5orf66Q9H5L9 145 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 C6orf106Q9H6K1 298 aaPredicted RBP5.73□□□□□ -1.49
USP28-202ENST00000535607 PTGES2Q9H7Z7 377 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.73□□□□□ -1.49
USP28-202ENST00000535607 ZNF346Q9UL40 294 aaKnown RBP5.73□□□□□ -1.49
USP28-202ENST00000535607 LRP12Q9Y561 859 aa5.73□□□□□ -1.49
USP28-202ENST00000535607 TECTAO75443 2155 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 ZNF860A6NHJ4 632 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 TMEM14DPA8MWL7 114 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 PRR32B1ATL7 298 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 C9JQL5 133 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 CYR61O00622 381 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 RRP8O43159 456 aaKnown RBP5.72□□□□□ -1.49
USP28-202ENST00000535607 FGF17O60258 216 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 SLC16A7O60669 478 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 CYTIPO60759 359 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 IGHMP01871 453 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 IGHV4-34P06331 123 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 LINC00614P0C842 121 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 OR13C7P0DN81 318 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 GP1BBP13224 206 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 GNB3P16520 340 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 ZNF708P17019 499 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 PGCP20142 388 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 SERPINA2P20848 420 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 CD27P26842 260 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 GALNSP34059 522 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 NOVA1P51513 510 aaKnown RBP5.72□□□□□ -1.49
USP28-202ENST00000535607 CCR4P51679 360 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 ZNF133P52736 654 aaPredicted RBP5.72□□□□□ -1.49
USP28-202ENST00000535607 MTCP1P56278 107 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 RANP62826 216 aaKnown RBP5.72□□□□□ -1.49
USP28-202ENST00000535607 HLA-DRB3P79483 266 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 DMWDQ09019 674 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 GAGE1Q13065 139 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 SKP2Q13309 424 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 GAMTQ14353 236 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 NFATC4Q14934 902 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 ELOBQ15370 118 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 SGCBQ16585 318 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 ANKRD55Q3KP44 614 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 TMEM176BQ3YBM2 270 aaPredicted RBP5.72□□□□□ -1.49
USP28-202ENST00000535607 KHDC3LQ587J8 217 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 SUMO4Q6EEV6 95 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 FIGLAQ6QHK4 219 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 VN1R4Q7Z5H5 301 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 RABEPKQ7Z6M1 372 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 LHFPL1Q86WI0 220 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 TGIF2LXQ8IUE1 241 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 FOXRED2Q8IWF2 684 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 LGI3Q8N145 548 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 AVL9Q8NBF6 648 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 OR10AD1Q8NGE0 317 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 ZPLD1Q8TCW7 415 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 TMEM18Q96B42 140 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 FGGYQ96C11 551 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 OR10C1Q96KK4 312 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 TSSK2Q96PF2 358 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 ABHD6Q9BV23 337 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 TMEM59Q9BXS4 323 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 TXNIPQ9H3M7 391 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 LIN7CQ9NUP9 197 aaKnown RBP5.72□□□□□ -1.49
USP28-202ENST00000535607 EHFQ9NZC4 300 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 FOXJ2Q9P0K8 574 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 VAX2Q9UIW0 290 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 RNF150Q9ULK6 438 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 SLC22A13Q9Y226 551 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 OSGIN2Q9Y236 505 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 SLC17A4Q9Y2C5 497 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 MRPS28Q9Y2Q9 187 aaKnown RBP5.72□□□□□ -1.49
USP28-202ENST00000535607 FBXO7Q9Y3I1 522 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 LSM5Q9Y4Y9 91 aaKnown RBP5.72□□□□□ -1.49
USP28-202ENST00000535607 KMT2EQ8IZD2 1858 aa5.72□□□□□ -1.49
USP28-202ENST00000535607 TTC28Q96AY4 2481 aa5.71□□□□□ -1.49
USP28-202ENST00000535607 TRPM6Q9BX84 2022 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 SCN3AQ9NY46 2000 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 IGKV1D-42A0A075B6H8 117 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 NSG1A0A0A6YYJ2 146 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 A0A1B0GTH9 108 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 A8MWP6 167 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 C9J4A7 227 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 ZNF878C9JN71 531 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 KCNAB3O43448 404 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms