RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 CNIH1O95406 144 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 OR5H8P0DN80 308 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 HIST1H1CP16403 213 aaKnown RBP4.91□□□□□ -1.62
CD44-237ENST00000534082 PYCR1P32322 319 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 SLC15A1P46059 708 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 MFGE8Q08431 387 aaPredicted RBP4.91□□□□□ -1.62
CD44-237ENST00000534082 ZSCAN26Q16670 478 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 CEACAM21Q3KPI0 293 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 KRT71Q3SY84 523 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 HEPN1Q6WQI6 88 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 EIF1ADQ8N9N8 165 aaKnown RBP4.91□□□□□ -1.62
CD44-237ENST00000534082 PROKR2Q8NFJ6 384 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 OR10A6Q8NH74 314 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 GIMAP1Q8WWP7 306 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 TMEM106AQ96A25 262 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 HSPB9Q9BQS6 159 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 ELOVL1Q9BW60 279 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 GAL3ST2Q9H3Q3 398 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 HES4Q9HCC6 221 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 THAP1Q9NVV9 213 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 POLDIP2Q9Y2S7 368 aa4.91□□□□□ -1.62
CD44-237ENST00000534082 UBE2J1Q9Y385 318 aaPredicted RBP4.91□□□□□ -1.62
CD44-237ENST00000534082 A0A0J9YWU9 116 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 DHRS12A0PJE2 317 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 PRSS29PA6NIE9 313 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 FAM183AA6NL82 134 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 H0Y980 276 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 FFAR1O14842 300 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 NOS1APO75052 506 aaPredicted RBP4.9□□□□□ -1.63
CD44-237ENST00000534082 APOC1P02654 83 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 IGF1P05019 195 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 HAAOP46952 286 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 MRPL19P49406 292 aaKnown RBP4.9□□□□□ -1.63
CD44-237ENST00000534082 PRRX1P54821 245 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 TMED1Q13445 227 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 GRK1Q15835 563 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 LRRC23Q53EV4 343 aaPredicted RBP4.9□□□□□ -1.63
CD44-237ENST00000534082 CYBRD1Q53TN4 286 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 UTF1Q5T230 341 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 PLCXD3Q63HM9 321 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 RRM2BQ7LG56 351 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 Q8N9W7 124 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 OR5A2Q8NGI9 324 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 FAM81AQ8TBF8 368 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 FANK1Q8TC84 345 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 TPD52L3Q96J77 140 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 SNX22Q96L94 193 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 LRGUKQ96M69 825 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 CGREF1Q99674 301 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 CHCHD6Q9BRQ6 235 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 TMEM120AQ9BXJ8 343 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 CHST6Q9GZX3 395 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 TOLLIPQ9H0E2 274 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 CCDC134Q9H6E4 229 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 ING3Q9NXR8 418 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 ZNF580Q9UK33 172 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 MRPS28Q9Y2Q9 187 aaKnown RBP4.9□□□□□ -1.63
CD44-237ENST00000534082 AMMECR1Q9Y4X0 333 aaPredicted RBP4.9□□□□□ -1.63
CD44-237ENST00000534082 SNX13Q9Y5W8 968 aa4.9□□□□□ -1.63
CD44-237ENST00000534082 FAT1Q14517 4588 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 TRGV10A0A0A0MS01 117 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 UNC119BA6NIH7 251 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 ARPC3O15145 178 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 SHOXO15266 292 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 SNNO75324 88 aaPredicted RBP4.89□□□□□ -1.63
CD44-237ENST00000534082 RGS11O94810 467 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 IFNA14P01570 189 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 TFAP2AP05549 437 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 LGALS1P09382 135 aaKnown RBP4.89□□□□□ -1.63
CD44-237ENST00000534082 GABRR1P24046 479 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 PEX2P28328 305 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 PPIFP30405 207 aaKnown RBP4.89□□□□□ -1.63
CD44-237ENST00000534082 SLC6A6P31641 620 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 GZMMP51124 257 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 RAB7AP51149 207 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 P2RX3P56373 397 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 DIAPH2-AS1Q14236 149 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 MOB3CQ70IA8 216 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 ZNF573Q86YE8 665 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 OR8H3Q8N146 312 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 C17orf53Q8N3J3 647 aaPredicted RBP4.89□□□□□ -1.63
CD44-237ENST00000534082 MREGQ8N565 214 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 Q8N6K4 173 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 OR51L1Q8NGJ5 315 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 ZNRF4Q8WWF5 429 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 RGP1Q92546 391 aaPredicted RBP4.89□□□□□ -1.63
CD44-237ENST00000534082 OVOL2Q9BRP0 275 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 PRR13Q9NZ81 148 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 SLC7A11Q9UPY5 501 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 WSB1Q9Y6I7 421 aa4.89□□□□□ -1.63
CD44-237ENST00000534082 A0A087X0M5 115 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 IGHV3-72A0A0B4J1Y9 119 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 A0A1B0GX30 115 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 ZNF593O00488 134 aaPredicted RBP4.88□□□□□ -1.63
CD44-237ENST00000534082 XRCC3O43542 346 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 MPZL2O60487 215 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 RHCEP18577 417 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 SOX6P35712 828 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 PTGFRP43088 359 aa4.88□□□□□ -1.63
CD44-237ENST00000534082 OMPP47874 163 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms