RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 C17orf107Q6ZR85 190 aa12.99□□□□□ -0.33
TSKU-204ENST00000533752 MS4A15Q8N5U1 240 aa12.99□□□□□ -0.33
TSKU-204ENST00000533752 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.99□□□□□ -0.33
TSKU-204ENST00000533752 OR4M1Q8NGD0 313 aa12.99□□□□□ -0.33
TSKU-204ENST00000533752 CNBD2Q96M20 576 aa12.99□□□□□ -0.33
TSKU-204ENST00000533752 OR14A2Q96R54 314 aa12.99□□□□□ -0.33
TSKU-204ENST00000533752 Q9H521 79 aa12.99□□□□□ -0.33
TSKU-204ENST00000533752 PAK1IP1Q9NWT1 392 aaPredicted RBP12.99□□□□□ -0.33
TSKU-204ENST00000533752 TRBV5-7A0A0A0MS05 114 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 hADV38S2A0JD32 116 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 TMEM82A0PJX8 343 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 RNASEK-C17orf49H0YIS7 233 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 OR2H2O95918 312 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 RNASE1P07998 156 aaKnown RBP12.98□□□□□ -0.33
TSKU-204ENST00000533752 CRHBPP24387 322 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 DUSP1P28562 367 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 ERP29P30040 261 aaKnown RBP12.98□□□□□ -0.33
TSKU-204ENST00000533752 UBE2E1P51965 193 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 SNU13P55769 128 aaKnown RBP12.98□□□□□ -0.33
TSKU-204ENST00000533752 IRF3Q14653 427 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 RSU1Q15404 277 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 MED22Q15528 200 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 RBM48Q5RL73 367 aaKnown RBP12.98□□□□□ -0.33
TSKU-204ENST00000533752 PRSS48Q7RTY5 328 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 RNF144BQ7Z419 303 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 TMEM86BQ8N661 226 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 TNFRSF14Q92956 283 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 DERL3Q96Q80 235 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 S100A13Q99584 98 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 HEXA-AS1Q9H8Q6 139 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 PCDHB16Q9NRJ7 776 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 IL36GQ9NZH8 169 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 FOXJ3Q9UPW0 622 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 LSM2Q9Y333 95 aaKnown RBP12.98□□□□□ -0.33
TSKU-204ENST00000533752 SF3B6Q9Y3B4 125 aaKnown RBP12.98□□□□□ -0.33
TSKU-204ENST00000533752 FAM96BQ9Y3D0 163 aa12.98□□□□□ -0.33
TSKU-204ENST00000533752 SIRPB1O00241 398 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 NPFFO15130 113 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 ZNF780AO75290 641 aaPredicted RBP12.97□□□□□ -0.33
TSKU-204ENST00000533752 FBP1P09467 338 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 ZNF728P0DKX0 622 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 ZNF44P15621 663 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 LMO1P25800 156 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 PTGFRP43088 359 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 OR3A1P47881 315 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 ERVFRD-1P60508 538 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 GPR50Q13585 617 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 DOC2BQ14184 412 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 EDDM3AQ14507 147 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 ZNF273Q14593 569 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 IL13RA2Q14627 380 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 SLC9A3R2Q15599 337 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 CDH26Q8IXH8 852 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 PDZD9Q8IXQ8 264 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 NKAIN3Q8N8D7 197 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 SSMEM1Q8WWF3 244 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 UFD1Q92890 307 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 ZNF184Q99676 751 aaPredicted RBP12.97□□□□□ -0.33
TSKU-204ENST00000533752 METTL9Q9H1A3 318 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 POMT1Q9Y6A1 747 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 LINC00312Q9Y6C7 94 aa12.97□□□□□ -0.33
TSKU-204ENST00000533752 MDFIC2A0A1B0GVS7 189 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 DEGS1O15121 323 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.33
TSKU-204ENST00000533752 PSPNO60542 156 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 PAHP00439 452 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 CSN2P05814 226 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 CALCBP10092 127 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 TGFBR2P37173 567 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 OR3A4PP47883 348 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 P2RX3P56373 397 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 KLRD1Q13241 179 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 MIDNQ504T8 468 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 Q6YL49 198 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 LDLRAD3Q86YD5 345 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 Q8NFD4 153 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 OR51T1Q8NGJ9 327 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 GCDHQ92947 438 aaPredicted RBP12.96□□□□□ -0.33
TSKU-204ENST00000533752 C1orf147Q96MC9 270 aaPredicted RBP12.96□□□□□ -0.33
TSKU-204ENST00000533752 ZNF714Q96N38 554 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 OR5M11Q96RB7 305 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 CCDC90BQ9GZT6 254 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 CHST6Q9GZX3 395 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 ISYNA1Q9NPH2 558 aa12.96□□□□□ -0.33
TSKU-204ENST00000533752 SOX21Q9Y651 276 aaPredicted RBP12.96□□□□□ -0.33
TSKU-204ENST00000533752 TRAV8-7A0A075B6U6 113 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 A0A0U1RQK1 487 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 C17orf98A8MV24 154 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 CSTBP04080 98 aaKnown RBP12.95□□□□□ -0.34
TSKU-204ENST00000533752 MELTFP08582 738 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 CCL3L1P16619 93 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 GPR176Q14439 515 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 NHLRC3Q5JS37 347 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 Q6P435 159 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 LINC00596Q86U02 117 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 OR4S1Q8NGB4 309 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 SGCDQ92629 289 aa12.95□□□□□ -0.34
TSKU-204ENST00000533752 DUX5Q96PT3 197 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms