RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 C2orf68Q2NKX9 166 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 CRIP3Q6Q6R5 217 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 SERPINA12Q8IW75 414 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 DYNAPQ8N1N2 210 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 PQLC1Q8N2U9 271 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 OR5D14Q8NGL3 314 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 RPS4Y2Q8TD47 263 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 COMMD4Q9H0A8 199 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 ISG20L2Q9H9L3 353 aaKnown RBP12.5□□□□□ -0.41
CPSF1-211ENST00000533492 PITPNC1Q9UKF7 332 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 RPL36Q9Y3U8 105 aaKnown RBP12.5□□□□□ -0.41
CPSF1-211ENST00000533492 SESN1Q9Y6P5 492 aa12.5□□□□□ -0.41
CPSF1-211ENST00000533492 TMEM212A6NML5 194 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 OR2H2O95918 312 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 CSF1P09603 554 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 CCDC159P0C7I6 412 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 TMEM225BP0DP42 221 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 ZNF44P15621 663 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 ERP29P30040 261 aaKnown RBP12.49□□□□□ -0.41
CPSF1-211ENST00000533492 OR3A1P47881 315 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 EFNB2P52799 333 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 P2RX3P56373 397 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 KLHL22Q53GT1 634 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 TCF23Q7RTU1 214 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 ZNF555Q8NEP9 628 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 OR5AK2Q8NH90 309 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 FAM110DQ8TAY7 271 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-211ENST00000533492 NDNFQ8TB73 568 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 TSEN15Q8WW01 171 aaKnown RBP12.49□□□□□ -0.41
CPSF1-211ENST00000533492 CDCA4Q9BXL8 241 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 RHOFQ9HBH0 211 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 FAM118AQ9NWS6 357 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 ERVK13-1Q9NX77 482 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 DHDHQ9UQ10 334 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 TCF19Q9Y242 345 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 UBE2J1Q9Y385 318 aaPredicted RBP12.49□□□□□ -0.41
CPSF1-211ENST00000533492 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
CPSF1-211ENST00000533492 TRGV10A0A0A0MS01 117 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 IGKV1-12A0A0C4DH73 117 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 H3BUI4 141 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 CHST1O43916 411 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 KDM4BO94953 1096 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 ZFPL1O95159 310 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 IGKV1D-12P01611 117 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 MINOS1Q5TGZ0 78 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 SAXO1Q8IYX7 474 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 OR52I1Q8NGK6 324 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 HAVCR2Q8TDQ0 301 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 PDCD1LG2Q9BQ51 273 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 CLEC7AQ9BXN2 247 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 TMEM133Q9H2Q1 129 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 GAL3ST2Q9H3Q3 398 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 MINOS1-NBL1R4GNA1 71 aa12.48□□□□□ -0.41
CPSF1-211ENST00000533492 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
CPSF1-211ENST00000533492 KIAA2026Q5HYC2 2103 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 VWFP04275 2813 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 IGHV2-26A0A0B4J1V2 119 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 E9PI62 339 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 DEGS1O15121 323 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 MAGEB3O15480 346 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 SULT1B1O43704 296 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 ALX3O95076 343 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 TSPAN15O95858 294 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 VSIG10L2P0DP72 767 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 LMO1P25800 156 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 SLC34A1Q06495 639 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 AESQ08117 197 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 KISS1Q15726 138 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 PDLIM3Q53GG5 364 aaPredicted RBP12.47□□□□□ -0.41
CPSF1-211ENST00000533492 OR52W1Q6IF63 320 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 RNF144BQ7Z419 303 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 TMEM219Q86XT9 240 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 PARP16Q8N5Y8 322 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 KLHDC1Q8N7A1 406 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 C11orf44Q8N8P7 122 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 CPNE2Q96FN4 548 aaPredicted RBP12.47□□□□□ -0.41
CPSF1-211ENST00000533492 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
CPSF1-211ENST00000533492 ING3Q9NXR8 418 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 FOXJ3Q9UPW0 622 aa12.47□□□□□ -0.41
CPSF1-211ENST00000533492 A0A0G2JK05 382 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 A6NDX4 124 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 F2RL2O00254 374 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 PEX14O75381 377 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 HTR1DP28221 377 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 IL18R1Q13478 541 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 ARSJQ5FYB0 599 aaPredicted RBP12.46□□□□□ -0.41
CPSF1-211ENST00000533492 LDLRAD2Q5SZI1 272 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 ZNF691Q5VV52 312 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 CCBE1Q6UXH8 406 aaPredicted RBP12.46□□□□□ -0.41
CPSF1-211ENST00000533492 CHST4Q8NCG5 386 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 STMN2Q93045 179 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 GPER1Q99527 375 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 ZNF649Q9BS31 505 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 SMPD3Q9NY59 655 aaPredicted RBP12.46□□□□□ -0.41
CPSF1-211ENST00000533492 TAS2R3Q9NYW6 316 aa12.46□□□□□ -0.41
CPSF1-211ENST00000533492 MMP23AO75900 390 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 RAB3AP20336 220 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 CDK2P24941 298 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 GLIPR1P48060 266 aa12.45□□□□□ -0.42
CPSF1-211ENST00000533492 SOX2P48431 317 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms