RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 PP6455Q8WZ26 134 aa10.81□□□□□ -0.68
BDNF-218ENST00000533246 ADAT3Q96EY9 351 aaPredicted RBP10.81□□□□□ -0.68
BDNF-218ENST00000533246 ZNF385AQ96PM9 386 aaKnown RBP10.81□□□□□ -0.68
BDNF-218ENST00000533246 ZDHHC8Q9ULC8 765 aa10.81□□□□□ -0.68
BDNF-218ENST00000533246 A6NNC1 897 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 IQCJQ1A5X6 159 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 EDARADDQ8WWZ3 215 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 H1FXQ92522 213 aaKnown RBP10.8□□□□□ -0.68
BDNF-218ENST00000533246 KLF2Q9Y5W3 355 aaPredicted RBP10.8□□□□□ -0.68
BDNF-218ENST00000533246 TRAV39A0A0B4J263 110 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 LMX1BO60663 402 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 SULT1A3P0DMM9 295 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 SULT1A4P0DMN0 295 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 CDX1P47902 265 aaPredicted RBP10.8□□□□□ -0.68
BDNF-218ENST00000533246 RSPO4Q2I0M5 234 aaPredicted RBP10.8□□□□□ -0.68
BDNF-218ENST00000533246 GTF2H5Q6ZYL4 71 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 COMMD1Q8N668 190 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 C2orf50Q96LR7 162 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 DOK5Q9P104 306 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 GAB2Q9UQC2 676 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 KLF13Q9Y2Y9 288 aaPredicted RBP10.8□□□□□ -0.68
BDNF-218ENST00000533246 SF3B6Q9Y3B4 125 aaKnown RBP10.8□□□□□ -0.68
BDNF-218ENST00000533246 IGHV5-10-1A0A0J9YXX1 117 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 OR6C6A6NF89 314 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 ENSAO43768 121 aaKnown RBP10.8□□□□□ -0.68
BDNF-218ENST00000533246 H2AFB1P0C5Y9 115 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 PJVKQ0ZLH3 352 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 ZNF266Q14584 549 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 ATP6V1FQ16864 119 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 OR2D3Q8NGH3 330 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 ABHD3Q8WU67 409 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 HGDQ93099 445 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 PLEKHF2Q9H8W4 249 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 PATZ1Q9HBE1 687 aaKnown RBP10.8□□□□□ -0.68
BDNF-218ENST00000533246 CA10Q9NS85 328 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 TMEM100Q9NV29 134 aa10.8□□□□□ -0.68
BDNF-218ENST00000533246 CEP350Q5VT06 3117 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 HLA-DQB1P01920 261 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 DTYMKP23919 212 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 SPEM2Q0P670 501 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 IL11RAQ14626 422 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 DHRS7BQ6IAN0 325 aaPredicted RBP10.79□□□□□ -0.68
BDNF-218ENST00000533246 PRR27Q6MZM9 219 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 SLC26A10Q8NG04 563 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 TMEM208Q9BTX3 173 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 GNG13Q9P2W3 67 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 ZNF816-ZNF321PA0A0X1KG74 233 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 A0A1W2PPE2 198 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 C5orf52A6NGY3 159 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 UBE2CO00762 179 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 PIN1P1O15428 100 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 ONECUT2O95948 504 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 BGLAPP02818 100 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 CA6P23280 308 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 TNFSF4P23510 183 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 AWAT1Q58HT5 328 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 ZDHHC23Q8IYP9 409 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 ARRDC1Q8N5I2 433 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 HIST1H2BAQ96A08 127 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 TMEM18Q96B42 140 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 CDX2Q99626 313 aaPredicted RBP10.79□□□□□ -0.68
BDNF-218ENST00000533246 WDR13Q9H1Z4 485 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 DOCK9Q9BZ29 2069 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 LNP1A1A4G5 178 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 JTBO76095 146 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 KRASP01116 189 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 GSK3AP49840 483 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 HBG1P69891 147 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 HBG2P69892 147 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 PYY3Q5JQD4 70 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 ZNF626Q68DY1 528 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 ARHGEF39Q8N4T4 335 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 ASB10Q8WXI3 467 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 ZNF501Q96CX3 271 aaPredicted RBP10.79□□□□□ -0.68
BDNF-218ENST00000533246 NDUFAF3Q9BU61 184 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 SEC11CQ9BY50 192 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 SAMD10Q9BYL1 202 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 GAL3ST2Q9H3Q3 398 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 AKIRIN1Q9H9L7 192 aaPredicted RBP10.79□□□□□ -0.68
BDNF-218ENST00000533246 MRPS18BQ9Y676 258 aaKnown RBP10.79□□□□□ -0.68
BDNF-218ENST00000533246 FER1L5A0AVI2 2057 aa10.79□□□□□ -0.68
BDNF-218ENST00000533246 RBBP6Q7Z6E9 1792 aaKnown RBP10.78□□□□□ -0.68
BDNF-218ENST00000533246 PIGBOS1A0A0B4J2F0 54 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 SLC22A20A6NK97 555 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 SERPINE3A8MV23 424 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 DHRS3O75911 302 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 ADRA2AP08913 450 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 FUT3P21217 361 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 AADACP22760 399 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 KIR3DL2P43630 455 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 RAC1P63000 192 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 COL5A1-AS1Q5SY13 56 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 MRGPREQ86SM8 312 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 DTWD2Q8NBA8 298 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 PGLYRP3Q96LB9 341 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 RALGAPA1Q6GYQ0 2036 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 RLFQ13129 1914 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 C9orf170A2RU37 121 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 CTSSP25774 331 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 CD81P60033 236 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms