RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 BMXP51813 675 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 SNU13P55769 128 aaKnown RBP16.76■□□□□ 0.27
CCS-208ENST00000533244 GPR50Q13585 617 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 ZNF273Q14593 569 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 MED22Q15528 200 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 Q6P435 159 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 UNQ9370/PRO34162Q6UXP9 181 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 RBMS3Q6XE24 437 aaKnown RBP16.76■□□□□ 0.27
CCS-208ENST00000533244 MS4A15Q8N5U1 240 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 SPATA3Q8NHX4 192 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 NKX3-1Q99801 234 aaPredicted RBP16.76■□□□□ 0.27
CCS-208ENST00000533244 EXOSC4Q9NPD3 245 aaKnown RBP16.76■□□□□ 0.27
CCS-208ENST00000533244 ISYNA1Q9NPH2 558 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 IL36GQ9NZH8 169 aa16.76■□□□□ 0.27
CCS-208ENST00000533244 MDFIC2A0A1B0GVS7 189 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 A0A1W2PPK0 400 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 SH2D1BO14796 132 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 DENRO43583 198 aaKnown RBP16.75■□□□□ 0.27
CCS-208ENST00000533244 SC5DO75845 299 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 OR2H2O95918 312 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 MAPK3P27361 379 aaPredicted RBP16.75■□□□□ 0.27
CCS-208ENST00000533244 OR3A1P47881 315 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 DLX1P56177 255 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 DLX6P56179 175 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 UBA52P62987 128 aaKnown RBP16.75■□□□□ 0.27
CCS-208ENST00000533244 BLMHQ13867 455 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 DEFB112Q30KQ8 113 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 GDPD3Q7L5L3 318 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 TCF23Q7RTU1 214 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 LYPD6Q86Y78 171 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 PIP4P2Q8N4L2 257 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 OR4S1Q8NGB4 309 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 OR51T1Q8NGJ9 327 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 BLOC1S6Q9UL45 172 aa16.75■□□□□ 0.27
CCS-208ENST00000533244 A0A1W2PPH5 198 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 DNAJC9-AS1A6NH13 148 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 TRIM77I1YAP6 450 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 MGST3O14880 152 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 GABRR1P24046 479 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 GUCA2AQ02747 115 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 MEF2CQ06413 473 aaPredicted RBP16.74■□□□□ 0.27
CCS-208ENST00000533244 KLRD1Q13241 179 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 TPBGQ13641 420 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 TBCEQ15813 527 aaPredicted RBP16.74■□□□□ 0.27
CCS-208ENST00000533244 GRK1Q15835 563 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 NCR3LG1Q68D85 454 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 HCP5Q6MZN7 132 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 CDH26Q8IXH8 852 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.74■□□□□ 0.27
CCS-208ENST00000533244 CHST4Q8NCG5 386 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 FAM216AQ8WUB2 273 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 FAM192AQ9GZU8 254 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 CHST6Q9GZX3 395 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 NOX4Q9NPH5 578 aa16.74■□□□□ 0.27
CCS-208ENST00000533244 CLDN34H7C241 214 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 SIRPB1O00241 398 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 CCL3L1P16619 93 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 ERP29P30040 261 aaKnown RBP16.73■□□□□ 0.27
CCS-208ENST00000533244 GP2P55259 537 aaKnown RBP16.73■□□□□ 0.27
CCS-208ENST00000533244 EDDM3BP56851 147 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 PRB3Q04118 309 aaPredicted RBP16.73■□□□□ 0.27
CCS-208ENST00000533244 IL13RA2Q14627 380 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 INSL4Q14641 139 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 ACSM3Q53FZ2 586 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 PDZD9Q8IXQ8 264 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 PPP1R35Q8TAP8 253 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 UFD1Q92890 307 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 CCDC90BQ9GZT6 254 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 Q9H521 79 aa16.73■□□□□ 0.27
CCS-208ENST00000533244 ZMAT3Q9HA38 289 aaKnown RBP16.73■□□□□ 0.27
CCS-208ENST00000533244 A0A0G2JK05 382 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 C17orf98A8MV24 154 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 RBP4P02753 201 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 CSN2P05814 226 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 MAP2K4P45985 399 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 UBE2E1P51965 193 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 GABARAPL2P60520 117 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 MLLT11Q13015 90 aaPredicted RBP16.72■□□□□ 0.27
CCS-208ENST00000533244 BAMBIQ13145 260 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 RSU1Q15404 277 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 NHLRC3Q5JS37 347 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 OR10K1Q8NGX5 313 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 TMED9Q9BVK6 235 aa16.72■□□□□ 0.27
CCS-208ENST00000533244 A0A0U1RQK1 487 aa16.71■□□□□ 0.27
CCS-208ENST00000533244 SLC33A1O00400 549 aaPredicted RBP16.71■□□□□ 0.27
CCS-208ENST00000533244 CDRT1O95170 752 aa16.71■□□□□ 0.27
CCS-208ENST00000533244 ZNF44P15621 663 aa16.71■□□□□ 0.27
CCS-208ENST00000533244 P2RX3P56373 397 aa16.71■□□□□ 0.27
CCS-208ENST00000533244 EDDM3AQ14507 147 aa16.71■□□□□ 0.27
CCS-208ENST00000533244 LIPKQ5VXJ0 399 aa16.71■□□□□ 0.27
CCS-208ENST00000533244 Q6YL49 198 aa16.71■□□□□ 0.27
CCS-208ENST00000533244 METTL9Q9H1A3 318 aa16.71■□□□□ 0.27
CCS-208ENST00000533244 LINC00312Q9Y6C7 94 aa16.71■□□□□ 0.27
CCS-208ENST00000533244 hADV38S2A0JD32 116 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 NPFFO15130 113 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 MRPS14O60783 128 aaKnown RBP16.7■□□□□ 0.26
CCS-208ENST00000533244 MAS1P04201 325 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 ZNF728P0DKX0 622 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 CPEP16870 476 aa16.7■□□□□ 0.26
CCS-208ENST00000533244 SLC9A3R2Q15599 337 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms