RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 FOXJ3Q9UPW0 622 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 MAB21L2Q9Y586 359 aa13.71□□□□□ -0.21
PKP3-209ENST00000533069 SOX21Q9Y651 276 aaPredicted RBP13.71□□□□□ -0.21
PKP3-209ENST00000533069 TRBV5-7A0A0A0MS05 114 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 MDFIC2A0A1B0GVS7 189 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 FAM230AA0A1W2PPH8 454 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 A0A1W2PQ09 198 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 MEGF11A6BM72 1044 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 H3BMQ9 156 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 H3BSH0 61 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 M0R1W7 72 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 PDCD5O14737 125 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 ALX3O95076 343 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 IL1AP01583 271 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 TFF1P04155 84 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 GUCA2AQ02747 115 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 FOXL1Q12952 345 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 CALHM1Q8IU99 346 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 CROCCP3Q8IVE0 287 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 ZNF561Q8N587 486 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 TMEM86BQ8N661 226 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 ZNRF1Q8ND25 227 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 DNAAF1Q8NEP3 725 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 TRMT10AQ8TBZ6 339 aaKnown RBP13.7□□□□□ -0.22
PKP3-209ENST00000533069 BORCS8Q96FH0 119 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 CPNE2Q96FN4 548 aaPredicted RBP13.7□□□□□ -0.22
PKP3-209ENST00000533069 ZNF488Q96MN9 340 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 OR14A2Q96R54 314 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 TCF7L1Q9HCS4 588 aa13.7□□□□□ -0.22
PKP3-209ENST00000533069 RFPL4AA6NLU0 287 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 RFPL4AL1F8VTS6 287 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 HOXA3O43365 443 aaPredicted RBP13.69□□□□□ -0.22
PKP3-209ENST00000533069 CFPP27918 469 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 PRDX2P32119 198 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 CAPZA1P52907 286 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 ERVK11-1P61568 191 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 PPP3R1P63098 170 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 NCR3LG1Q68D85 454 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 C22orf42Q6IC83 251 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 Q6YL49 198 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 UTS2BQ765I0 119 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 ANGPTL5Q86XS5 388 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 RDH10Q8IZV5 341 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 CD177Q8N6Q3 437 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 C3orf56Q8N813 242 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 NPRL2Q8WTW4 380 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 METTL8Q9H825 291 aaKnown RBP13.69□□□□□ -0.22
PKP3-209ENST00000533069 POMT1Q9Y6A1 747 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 TENM1Q9UKZ4 2725 aa13.69□□□□□ -0.22
PKP3-209ENST00000533069 A0A1W2PPH5 198 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 KNG1P01042 644 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 SRMP19623 302 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 PRKACBP22694 351 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 CALRP27797 417 aaKnown RBP13.68□□□□□ -0.22
PKP3-209ENST00000533069 RBP2P50120 134 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 AWAT1Q58HT5 328 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 CDH26Q8IXH8 852 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 Q8IYB0 196 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 Q8N7P7 452 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 NKAIN3Q8N8D7 197 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 ADAT3Q96EY9 351 aaPredicted RBP13.68□□□□□ -0.22
PKP3-209ENST00000533069 CEP19Q96LK0 163 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 CENPOQ9BU64 300 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 NAA50Q9GZZ1 169 aaKnown RBP13.68□□□□□ -0.22
PKP3-209ENST00000533069 FAM234AQ9H0X4 552 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 UNKLQ9H9P5 680 aaKnown RBP13.68□□□□□ -0.22
PKP3-209ENST00000533069 SIRT7Q9NRC8 400 aa13.68□□□□□ -0.22
PKP3-209ENST00000533069 IGKV1-27A0A075B6S5 117 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 MELTFP08582 738 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 SOX6P35712 828 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 SOX2P48431 317 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 ATP1B3P54709 279 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 VBP1P61758 197 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 C16orf87Q6PH81 154 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 OR51A4Q8NGJ6 313 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 OR13C5Q8NGS8 318 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 TBC1D15Q8TC07 691 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 SSMEM1Q8WWF3 244 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 SPSB1Q96BD6 273 aa13.67□□□□□ -0.22
PKP3-209ENST00000533069 ELL3Q9HB65 397 aaPredicted RBP13.67□□□□□ -0.22
PKP3-209ENST00000533069 A0A0U1RQK1 487 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 MAGEB3O15480 346 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 CYB5AP00167 134 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 ATF1P18846 271 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 AZGP1P25311 298 aaKnown RBP13.66□□□□□ -0.22
PKP3-209ENST00000533069 NCS1P62166 190 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 LSM3P62310 102 aaKnown RBP13.66□□□□□ -0.22
PKP3-209ENST00000533069 LHFPL2Q6ZUX7 228 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 SLC25A26Q70HW3 274 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 LDLRAD3Q86YD5 345 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 PDZD9Q8IXQ8 264 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 FAM185AQ8N0U4 392 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 OR5D13Q8NGL4 314 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 OR10AC1Q8NH08 325 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 TNFRSF14Q92956 283 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 FGGYQ96C11 551 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 FOXRED1Q96CU9 486 aaPredicted RBP13.66□□□□□ -0.22
PKP3-209ENST00000533069 DCSTAMPQ9H295 470 aa13.66□□□□□ -0.22
PKP3-209ENST00000533069 ZCCHC4Q9H5U6 513 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms