RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 HLXQ14774 488 aaPredicted RBP13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 TTTY12Q9BZ98 90 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 LIFP15018 202 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 PDZK1IP1Q13113 114 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 BAK1Q16611 211 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 FBXW9Q5XUX1 488 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 TEX29Q8N6K0 151 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 ZNF586Q9NXT0 402 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 CES1P1Q9UKY3 287 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 ARID2Q68CP9 1835 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 SPINK9Q5DT21 86 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 CADM3Q8N126 398 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 OR2M3Q8NG83 312 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 HSD17B10Q99714 261 aaKnown RBP13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 MTFP1Q9UDX5 166 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 FOSL1P15407 271 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 NTF3P20783 257 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 ZFP36L2P47974 494 aaKnown RBP13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 TMPRSS3P57727 454 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 TAGLNQ01995 201 aaKnown RBP13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 PJVKQ0ZLH3 352 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 SP6Q3SY56 376 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 C4orf17Q53FE4 359 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 ZNF770Q6IQ21 691 aaPredicted RBP13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 RASL11BQ9BPW5 248 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 ZNF665Q9H7R5 613 aa13.03□□□□□ -0.32
PCDHA9-202ENST00000532602 ZNF260Q3ZCT1 412 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 OR8B12Q8NGG6 310 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 OR1L4Q8NGR5 311 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 LPAR3Q9UBY5 353 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 C3orf85A0A1B0GTC6 90 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 GFRA3O60609 400 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 IGKV1D-16P01601 117 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 IL11P20809 199 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 SLC38A11Q08AI6 406 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 FABP9Q0Z7S8 132 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 C19orf48Q6RUI8 117 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 ETV3LQ6ZN32 361 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 COMMD1Q8N668 190 aa13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 WDR89Q96FK6 387 aaPredicted RBP13.02□□□□□ -0.32
PCDHA9-202ENST00000532602 MS4A18H0YCH9 400 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 NDUFB6O95139 128 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 CDC20Q12834 499 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 MS4A18Q3C1V0 323 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 C17orf47Q8NEP4 570 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 GPR35Q9HC97 309 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 J3QT63 122 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 K7ESF4 209 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 FFAR1O14842 300 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 H3F3AP84243 136 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 ZNF705AQ6ZN79 300 aaPredicted RBP13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 CLCF1Q9UBD9 225 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 OOEPA6NGQ2 149 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 ATP6V1G2-DDX39BF2Z307 99 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 ACSM4P0C7M7 580 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 RHOBP62745 196 aa13.02□□□□□ -0.33
PCDHA9-202ENST00000532602 PYCARD-AS1I3L0S3 204 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 SOX15O60248 233 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 MOGAT3Q86VF5 341 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 CCL27Q9Y4X3 112 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 IGHV1-45A0A0A0MS14 117 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 RFPL4AA6NLU0 287 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 RFPL4AL1F8VTS6 287 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 CA11O75493 328 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 SPNP16150 400 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 GLDNQ6ZMI3 551 aaPredicted RBP13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 OR5R1Q8NH85 324 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 TNXAQ16473 311 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 FNDC7Q5VTL7 733 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 DIRC2Q96SL1 478 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 DDA1Q9BW61 102 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 PECRQ9BY49 303 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 NAA60Q9H7X0 242 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 CLN8Q9UBY8 286 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 TDRD6O60522 2096 aaKnown RBP13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 SFT2D2O95562 160 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 FCER1GP30273 86 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 CD96P40200 585 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 ATP6V1FQ16864 119 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 C1orf185Q5T7R7 199 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 RNF2Q99496 336 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 OR2H1Q9GZK4 316 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 OCEL1Q9H607 264 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 CNTD2Q9H8S5 307 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 FAM157AC9JC47 383 aa13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
PCDHA9-202ENST00000532602 CTAG2O75638 210 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 SIGLECL1Q8N7X8 197 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 TMEM210A6NLX4 147 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 B3GALNT1O75752 331 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 IGHA2P01877 340 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 C11orf87Q6NUJ2 197 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 ZNF788Q6ZQV5 615 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 SLC25A40Q8TBP6 338 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 CST4P01036 141 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 COX6B1P14854 86 aa13□□□□□ -0.33
PCDHA9-202ENST00000532602 SAP25Q8TEE9 199 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms